CAZyme Information: MGYG000002171_01087

Basic Information

• Species: Phocaeicola sp002493165
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002493165
• CAZyme ID: MGYG000002171_01087
• CAZy Family: GH3
• CAZyme Description: Beta-glucosidase BoGH3B

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
771	MGYG000002171_20|CGC1	84267.42	7.069

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002171	3793747	MAG	Denmark	Europe

• Gene Location: Start: 229; End: 2544 Strand: -

Full Sequence      

MICAVHVPAQTPLYKQPAASVESRVKDLLGRMTVNEKIGQLCCPLGWEMYTKTSKGVVPS
ELYKERMRTTPIGSFWAVLRADPWTQKTLETGLNPQSGAKALNALQKYAIDSTRLGIPIL
FAEECPHGHMAIGTTVFPTSLAQASTWNEKLMYTMGETIALEARLQGASIGYGPVLDIAR
EPRWSRMEETFGEDPVLTSTLGVAFMKGMQGEAQNDGKHLFSTLKHFAAYGIPESGHNGA
RANIGMRQLFSDYLPPFKKAVEAGVGTIMTSYNSIDGIPCTANKYLLSDILRKEWGFNGF
VYSDLSSIEGITGARVARNHKEASALALKAGVDMDLGGNAYGKNLRQALKEGLIGMQDID
RAVANVLRLKFRMGLFENPYVSPEKAGRTVRSQTHKKLARQVAREGVVLLKNEGILPLSK
QLKNIAVIGPNADNMYNQLGDYTAPQERKEITTVLDGIRNAVSSSTQVTYIKGCAIRDVT
VHHIPDAVEAAQKADAVIMVVGGSSARDFKTKYIETGAATVAQEEDQQLSDMECGEGYDR
STLKLLGHQEELIEAITSTGKPVVVIYIQGRPLNMNLAAEKAQALLTAWYPGEQGGAAIA
DILFGDYNPAGRLPVSIPRSEGQLPLFYSQGEQRAYVEEAGSPLYAFGYGLSYTQFDYSH
LKLEKGNTPDVLQKASCTITNTGNRDGEEVVQLYICDKVASVSQAPILLKGFQRIFLKKG
ESKQVTFVLGKEELSLYNMEMKQVVEPGEFKVMIGAASNDIRLNGEFVLTP

Enzyme Prediction     

No EC number prediction in MGYG000002171_01087.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	111	336	3.3e-71	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK15098	PRK15098	0.0	3	769	19	764	beta-glucosidase BglX.
PLN03080	PLN03080	1.51e-101	135	755	112	769	Probable beta-xylosidase; Provisional
COG1472	BglX	1.45e-98	32	465	1	394	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933	Glyco_hydro_3	8.95e-83	33	369	1	316	Glycosyl hydrolase family 3 N terminal domain.
pfam01915	Glyco_hydro_3_C	6.18e-70	407	653	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QEW35133.1	0.0	1	769	17	785
QQY39447.1	0.0	1	769	19	787
ABR38266.1	0.0	1	769	17	785
ADV43485.1	0.0	10	769	22	781
SCD22149.1	0.0	14	769	26	781

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6R5P_A	5.40e-147	6	758	20	754	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5I_A	3.34e-146	22	758	4	722	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	9.59e-146	18	758	1	723	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	1.85e-145	22	758	4	722	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
5YOT_A	1.81e-144	10	767	3	754	Isoprimeverose-producingenzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q56078	4.22e-153	25	769	38	764	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363	7.96e-150	25	769	38	764	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH0	4.89e-146	81	758	29	710	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
T2KMH9	7.40e-124	10	762	25	748	Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
A7LXU3	4.84e-90	6	761	21	768	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000054	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002171_01087.