dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002171_02915

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Species

Phocaeicola sp002493165

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002493165

CAZyme ID

MGYG000002171_02915

CAZy Family

GH29

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
368	MGYG000002171_106\|CGC1	42810.05	7.6341

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002171	3793747	MAG	Denmark	Europe

Gene Location

Start: 9241; End: 10347 Strand: -

No EC number prediction in MGYG000002171_02915.

Family	Start	End	Evalue	family coverage
GH29	62	363	1.2e-70	0.8294797687861272

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01120	Alpha_L_fucos	2.52e-52	64	362	26	324	Alpha-L-fucosidase.
smart00812	Alpha_L_fucos	1.53e-43	64	362	27	326	Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
COG3669	AfuC	6.53e-42	49	362	4	308	Alpha-L-fucosidase [Carbohydrate transport and metabolism].

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRO24265.1	8.10e-218	37	368	18	349
QCQ35196.1	7.42e-217	22	368	1	347
QTO26593.1	4.29e-216	22	368	1	347
QCQ30777.1	4.29e-216	22	368	1	347
QOD59462.1	3.67e-195	22	366	1	345

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4ZRX_A	5.88e-53	37	361	16	347	Crystalstructure of a putative alpha-L-fucosidase (BACOVA_04357) from Bacteroides ovatus ATCC 8483 at 1.59 A resolution [Bacteroides ovatus ATCC 8483]
6ORG_A	1.36e-40	52	364	10	317	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORG_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
5K9H_A	4.56e-40	37	355	23	341	Crystalstructure of a glycoside hydrolase 29 family member from an unknown rumen bacterium [unidentified]
6OR4_A	1.33e-39	52	364	10	317	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6OR4_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_A Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6ORF_A	1.35e-39	52	364	10	317	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORF_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8GW72	9.39e-44	26	361	7	335	Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2
Q7XUR3	7.53e-40	45	361	36	336	Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2
P10901	3.56e-13	64	220	41	232	Alpha-L-fucosidase OS=Dictyostelium discoideum OX=44689 GN=alfA PE=3 SV=1
P49713	1.59e-12	64	353	38	329	Putative alpha-L-fucosidase OS=Caenorhabditis elegans OX=6239 GN=W03G11.3 PE=3 SV=2
Q9VTJ4	1.23e-11	64	234	54	252	Putative alpha-L-fucosidase OS=Drosophila melanogaster OX=7227 GN=Fuca PE=2 SV=2

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.052518	0.945455	0.001264	0.000288	0.000223	0.000219

There is no transmembrane helices in MGYG000002171_02915.