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CAZyme Information: MGYG000002176_01829

You are here: Home > Sequence: MGYG000002176_01829

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; SFTJ01;
CAZyme ID MGYG000002176_01829
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
748 82870.38 9.8856
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002176 2675847 MAG Denmark Europe
Gene Location Start: 2046;  End: 4292  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002176_01829.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH23 127 260 4.5e-23 0.8592592592592593
CBM50 637 679 2.9e-16 0.975

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd16894 MltD-like 6.12e-66 133 262 1 129
Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
PRK10783 mltD 2.22e-42 125 549 104 446
membrane-bound lytic murein transglycosylase D; Provisional
pfam01464 SLT 1.86e-32 129 238 1 112
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
PRK06347 PRK06347 1.59e-30 508 742 333 591
1,4-beta-N-acetylmuramoylhydrolase.
PRK06347 PRK06347 1.03e-29 351 678 291 591
1,4-beta-N-acetylmuramoylhydrolase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQR10036.1 5.28e-183 1 550 1 546
ANU62627.1 5.28e-183 1 550 1 546
BCI63615.1 3.95e-171 30 679 27 649
QIM10870.1 5.34e-155 1 569 1 558
QCD38174.1 2.48e-144 1 550 1 570

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4B8V_A 1.45e-07 574 743 43 217
ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva]
2MKX_A 1.87e-07 637 678 7 48
Solutionstructure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis [Enterococcus faecalis V583]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P37710 6.48e-31 503 742 494 736
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
O07532 2.33e-26 508 745 94 353
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2
O31852 2.49e-25 510 742 31 268
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1
Q5HRU2 1.81e-23 572 743 26 191
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1
Q8CMN2 1.81e-23 572 743 26 191
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sle1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.431216 0.364434 0.201881 0.000688 0.000506 0.001264

TMHMM  Annotations      download full data without filtering help

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