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CAZyme Information: MGYG000002178_01643

You are here: Home > Sequence: MGYG000002178_01643

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; CAG-617;
CAZyme ID MGYG000002178_01643
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
866 95308.3 4.825
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002178 2197502 MAG Spain Europe
Gene Location Start: 89;  End: 2689  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002178_01643.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 545 750 4e-17 0.7263513513513513

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00704 Glyco_hydro_18 5.38e-07 544 746 74 307
Glycosyl hydrolases family 18.
smart00636 Glyco_18 1.45e-05 546 746 79 334
Glyco_18 domain.
pfam13385 Laminin_G_3 2.94e-05 51 170 20 149
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
TIGR04183 Por_Secre_tail 3.74e-04 816 861 24 69
Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.
cd00598 GH18_chitinase-like 0.005 498 640 31 176
The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI61689.1 5.40e-312 1 785 1 783
QUT78021.1 8.20e-266 21 863 16 850
AHF11971.1 1.92e-126 13 780 14 766
BCI61676.1 4.77e-123 21 775 22 761
QUT75436.1 1.00e-101 2 783 3 769

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000413 0.998859 0.000177 0.000204 0.000169 0.000151

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002178_01643.