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CAZyme Information: MGYG000002190_00278
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Clostridium sp001916075 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp001916075 | |||||||||||
| CAZyme ID | MGYG000002190_00278 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 34024; End: 36975 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5492 | YjdB | 3.74e-15 | 851 | 982 | 26 | 159 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| COG4193 | LytD | 8.60e-15 | 432 | 587 | 59 | 223 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| pfam07538 | ChW | 5.81e-13 | 950 | 980 | 3 | 33 | Clostridial hydrophobic W. A novel extracellular macromolecular system has been proposed based on the proteins containing ChW repeats. ChW stands for Clostridial hydrophobic with conserved W (tryptophan). This repeat was originally described in Clostridium acetobutylicum but is also found in other Gram-positive bacteria including Enterococcus faecalis, Streptococcus agalactiae and Streptomyces coelicolor. |
| pfam07538 | ChW | 5.61e-11 | 768 | 800 | 3 | 35 | Clostridial hydrophobic W. A novel extracellular macromolecular system has been proposed based on the proteins containing ChW repeats. ChW stands for Clostridial hydrophobic with conserved W (tryptophan). This repeat was originally described in Clostridium acetobutylicum but is also found in other Gram-positive bacteria including Enterococcus faecalis, Streptococcus agalactiae and Streptomyces coelicolor. |
| smart00728 | ChW | 1.36e-10 | 768 | 810 | 4 | 46 | Clostridial hydrophobic, with a conserved W residue, domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQA11780.1 | 3.83e-156 | 198 | 725 | 69 | 605 |
| ALG48000.1 | 9.01e-156 | 198 | 725 | 69 | 605 |
| AMN34859.1 | 1.73e-155 | 198 | 726 | 69 | 606 |
| AXH51676.1 | 4.16e-155 | 198 | 726 | 69 | 606 |
| AWS25220.1 | 8.23e-155 | 198 | 725 | 69 | 605 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4Q2W_A | 6.24e-15 | 454 | 598 | 149 | 288 | CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P59205 | 2.85e-14 | 383 | 598 | 433 | 656 | Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1 |
| P59206 | 3.03e-14 | 383 | 598 | 477 | 700 | Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001325 | 0.997822 | 0.000240 | 0.000212 | 0.000185 | 0.000173 |