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CAZyme Information: MGYG000002190_00869
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Clostridium sp001916075 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp001916075 | |||||||||||
| CAZyme ID | MGYG000002190_00869 | |||||||||||
| CAZy Family | CBM61 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 39847; End: 43515 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH53 | 178 | 542 | 1.1e-89 | 0.9941520467836257 |
| CBM61 | 34 | 165 | 2.8e-28 | 0.9716312056737588 |
| CBM61 | 893 | 1029 | 8.6e-28 | 0.9716312056737588 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3867 | GanB | 7.32e-74 | 175 | 542 | 38 | 391 | Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]. |
| pfam07745 | Glyco_hydro_53 | 1.22e-72 | 178 | 542 | 2 | 333 | Glycosyl hydrolase family 53. This domain belongs to family 53 of the glycosyl hydrolase classification. These enzymes are enzymes are endo-1,4- beta-galactanases (EC:3.2.1.89). The structure of this domain is known and has a TIM barrel fold. |
| pfam13620 | CarboxypepD_reg | 1.60e-12 | 721 | 801 | 1 | 81 | Carboxypeptidase regulatory-like domain. |
| pfam13620 | CarboxypepD_reg | 1.27e-11 | 636 | 715 | 2 | 81 | Carboxypeptidase regulatory-like domain. |
| pfam13620 | CarboxypepD_reg | 3.66e-05 | 808 | 887 | 2 | 81 | Carboxypeptidase regulatory-like domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QJS18184.1 | 8.81e-279 | 31 | 636 | 27 | 630 |
| AGI39701.1 | 9.22e-247 | 29 | 1038 | 343 | 1357 |
| AGC68692.1 | 9.22e-247 | 29 | 1038 | 343 | 1357 |
| ANW99026.1 | 3.56e-246 | 29 | 1038 | 343 | 1357 |
| ANX01554.1 | 9.81e-246 | 29 | 1038 | 343 | 1357 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7OSK_A | 4.07e-57 | 176 | 543 | 50 | 392 | ChainA, Arabinogalactan endo-1,4-beta-galactosidase [Ignisphaera aggregans DSM 17230],7OSK_B Chain B, Arabinogalactan endo-1,4-beta-galactosidase [Ignisphaera aggregans DSM 17230] |
| 1R8L_A | 2.58e-43 | 176 | 543 | 24 | 389 | Thestructure of endo-beta-1,4-galactanase from Bacillus licheniformis [Bacillus licheniformis],1R8L_B The structure of endo-beta-1,4-galactanase from Bacillus licheniformis [Bacillus licheniformis],1UR0_A The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],1UR0_B The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],1UR4_A The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],1UR4_B The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],2CCR_A Structure of Beta-1,4-Galactanase [Bacillus licheniformis],2CCR_B Structure of Beta-1,4-Galactanase [Bacillus licheniformis],2J74_A Structure of Beta-1,4-Galactanase [Bacillus licheniformis],2J74_B Structure of Beta-1,4-Galactanase [Bacillus licheniformis] |
| 2GFT_A | 1.59e-42 | 176 | 543 | 24 | 389 | ChainA, Glycosyl Hydrolase Family 53 [Bacillus licheniformis],2GFT_B Chain B, Glycosyl Hydrolase Family 53 [Bacillus licheniformis] |
| 4BF7_A | 3.63e-39 | 178 | 506 | 22 | 328 | Emericillanidulans endo-beta-1,4-galactanase [Aspergillus nidulans] |
| 1FHL_A | 2.60e-36 | 178 | 502 | 5 | 308 | CrystalStructure Of Beta-1,4-galactanase From Aspergillus Aculeatus At 293k [Aspergillus aculeatus],1FOB_A Crystal Structure Of Beta-1,4-galactanase From Aspergillus Aculeatus At 100k [Aspergillus aculeatus],6Q3R_A ASPERGILLUS ACULEATUS GALACTANASE [Aspergillus aculeatus],6Q3R_B ASPERGILLUS ACULEATUS GALACTANASE [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O07013 | 1.59e-44 | 176 | 549 | 53 | 424 | Endo-beta-1,4-galactanase OS=Bacillus subtilis (strain 168) OX=224308 GN=ganB PE=1 SV=1 |
| P48843 | 1.21e-42 | 176 | 550 | 6 | 354 | Uncharacterized protein in bgaB 5'region (Fragment) OS=Niallia circulans OX=1397 PE=3 SV=1 |
| Q65CX5 | 2.44e-42 | 176 | 543 | 49 | 414 | Endo-beta-1,4-galactanase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=ganB PE=1 SV=1 |
| Q5B153 | 1.90e-38 | 178 | 506 | 22 | 328 | Arabinogalactan endo-beta-1,4-galactanase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=galA PE=1 SV=2 |
| Q9Y7F8 | 2.92e-37 | 178 | 530 | 21 | 348 | Probable arabinogalactan endo-beta-1,4-galactanase A OS=Aspergillus tubingensis OX=5068 GN=galA PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.254479 | 0.654728 | 0.088921 | 0.000835 | 0.000442 | 0.000569 |
