CAZyme Information: MGYG000002196_00627

Basic Information

• Species: UBA1691 sp900552985
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UBA1691; UBA1691 sp900552985
• CAZyme ID: MGYG000002196_00627
• CAZy Family: GH25
• CAZyme Description: Cell division suppressor protein YneA

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
403	MGYG000002196_21|CGC1	45372.71	8.6514

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002196	2479856	MAG	Spain	Europe

• Gene Location: Start: 18643; End: 19854 Strand: +

Full Sequence      

MKKRWRRIQCALMSMVLVCVFFCETASALAPSGQRIYRGIDVSEYQGEIDFAQVKSSGIQ
VVYIRSSLGSDYVDPYFKRNYEGAKAEGLKIGFYHYVTARTTAQAEQEAHFFASTVAGTQ
PDCRLAMDFEYLNGLTAAQVNAIAWTFLQTLGRLTGKELVVYSDTSNARSVFDRRIAAAY
PLWVAQYGVETPDENGKWESWVGFQYTSAGRVNGISGNVDLDRFTEDIFLEAADNLPVPP
RPAPQKQTAIVLVTVRRGDTLWGIAQRYHTTVAELLQLNRVENPNLIYAGERLRVRVPLQ
DEPGVEITDYTVRRGDTLFSIARRFGTTIDSIVAMNSLRNPDLIYAGERLRIRRMALKTY
TVKKGDTLWAIARRFGTSVSVLAQLNQLENPDMIYQGQILQLP

Enzyme Prediction     

No EC number prediction in MGYG000002196_00627.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH25	40	215	3e-51	0.9943502824858758
CBM50	360	403	4.5e-16	0.975

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd06525	GH25_Lyc-like	6.16e-84	38	224	1	184	Lyc muramidase is an autolytic lysozyme (autolysin) from Clostridium acetobutylicum encoded by the lyc gene. Lyc has a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
cd00599	GH25_muramidase	5.66e-58	38	224	1	186	Endo-N-acetylmuramidases (muramidases) are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. This family of muramidases contains a glycosyl hydrolase family 25 (GH25) catalytic domain and is found in bacteria, fungi, slime molds, round worms, protozoans and bacteriophages. The bacteriophage members are referred to as endolysins which are involved in lysing the host cell at the end of the replication cycle to allow release of mature phage particles. Endolysins are typically modular enzymes consisting of a catalytically active domain that hydrolyzes the peptidoglycan cell wall and a cell wall-binding domain that anchors the protein to the cell wall. Endolysins generally have narrow substrate specificities with either intra-species or intra-genus bacteriolytic activity.
pfam01183	Glyco_hydro_25	2.66e-55	40	215	1	180	Glycosyl hydrolases family 25.
cd06414	GH25_LytC-like	1.69e-54	38	222	2	188	The LytC lysozyme of Streptococcus pneumoniae is a bacterial cell wall hydrolase that cleaves the beta1-4-glycosydic bond located between the N-acetylmuramoyl-N-glucosaminyl residues of the cell wall polysaccharide chains. LytC is composed of a C-terminal glycosyl hydrolase family 25 (GH25) domain and an N-terminal choline-binding module (CBM) consisting of eleven homologous repeats that specifically recognizes the choline residues of pneumococcal lipoteichoic and teichoic acids. This domain arrangement is the reverse of the major pneumococcal autolysin, LytA, and the CPL-1-like lytic enzymes of the pneumococcal bacteriophages, in which the CBM (consisting of six repeats) is at the C-terminus. This model represents the C-terminal catalytic domain of the LytC-like enzymes.
COG3757	Acm	7.49e-46	36	233	62	262	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QWT55024.1	9.00e-130	1	353	1	352
ANU77129.1	1.84e-110	23	352	20	347
QJU17248.1	1.84e-110	23	352	20	347
QQQ94705.1	1.84e-110	23	352	20	347
ASU29926.1	1.84e-110	23	352	20	347

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4KRU_A	2.76e-55	38	234	21	217	X-raystructure of catalytic domain of endolysin from clostridium perfringens phage phiSM101 [Clostridium phage phiSM101]
4KRT_A	9.00e-54	38	234	21	217	X-raystructure of endolysin from clostridium perfringens phage phiSM101 [Clostridium phage phiSM101],4KRT_B X-ray structure of endolysin from clostridium perfringens phage phiSM101 [Clostridium phage phiSM101]
5A6S_A	1.28e-29	26	229	11	206	Crystalstructure of the CTP1L endolysin reveals how its activity is regulated by a secondary translation product [Clostridium phage phiCTP1]
1JFX_A	7.69e-26	38	224	6	202	Crystalstructure of the bacterial lysozyme from Streptomyces coelicolor at 1.65 A resolution [Streptomyces coelicolor]
2WAG_A	5.12e-16	38	224	17	206	TheStructure of a family 25 Glycosyl hydrolase from Bacillus anthracis. [Bacillus anthracis str. Ames]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P26836	1.10e-51	38	229	10	201	Probable autolytic lysozyme OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=lyc PE=3 SV=2
P34020	1.36e-37	38	230	2	186	Autolytic lysozyme OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=lyc PE=1 SV=1
P25310	8.17e-25	29	224	74	279	Lysozyme M1 OS=Streptomyces globisporus OX=1908 GN=acm PE=1 SV=1
Q8X7H0	6.96e-24	31	240	62	272	Uncharacterized protein YegX OS=Escherichia coli O157:H7 OX=83334 GN=yegX PE=3 SV=2
P76421	2.50e-23	31	224	62	254	Uncharacterized protein YegX OS=Escherichia coli (strain K12) OX=83333 GN=yegX PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000675	0.867698	0.130824	0.000294	0.000253	0.000236

TMHMM  Annotations     

start	end
12	31