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CAZyme Information: MGYG000002203_00374

You are here: Home > Sequence: MGYG000002203_00374

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes;
CAZyme ID MGYG000002203_00374
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
445 MGYG000002203_3|CGC1 50659.38 5.4334
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002203 2806770 MAG Spain Europe
Gene Location Start: 4082;  End: 5419  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002203_00374.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 81 437 1.9e-35 0.4175531914893617

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 3.87e-25 78 434 124 487
beta-galactosidase.
COG3250 LacZ 3.98e-24 78 434 67 431
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 2.36e-21 84 434 119 474
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02836 Glyco_hydro_2_C 1.20e-13 338 434 61 160
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02837 Glyco_hydro_2_N 2.73e-07 78 175 69 153
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBL07145.1 4.13e-231 1 445 1 445
BBL00145.1 8.01e-212 1 445 1 453
BBL11042.1 2.29e-211 1 445 1 453
BBL08251.1 2.29e-211 1 445 1 453
AFL78621.1 7.31e-210 1 445 1 452

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DEC_A 1.80e-28 64 445 113 496
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 4.82e-26 64 445 117 500
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
3CZJ_A 9.33e-24 90 440 136 492
ChainA, Beta-galactosidase [Escherichia coli K-12],3CZJ_B Chain B, Beta-galactosidase [Escherichia coli K-12],3CZJ_C Chain C, Beta-galactosidase [Escherichia coli K-12],3CZJ_D Chain D, Beta-galactosidase [Escherichia coli K-12]
3VDA_A 9.45e-24 90 440 165 521
E.coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDA_B E. coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDA_C E. coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDA_D E. coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDB_A E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDB_B E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDB_C E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDB_D E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDC_A E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli],3VDC_B E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli],3VDC_C E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli],3VDC_D E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli]
3VD5_A 9.45e-24 90 440 165 521
E.coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_B E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_C E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_D E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD7_A E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_B E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_C E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_D E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD9_A E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_B E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_C E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_D E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],4DUX_A E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_B E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_C E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_D E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q48727 4.52e-26 91 434 125 456
Beta-galactosidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=lacZ PE=3 SV=3
Q04F24 4.97e-24 101 434 143 482
Beta-galactosidase OS=Oenococcus oeni (strain ATCC BAA-331 / PSU-1) OX=203123 GN=lacZ PE=3 SV=1
B7N8Q1 1.59e-23 90 440 137 493
Beta-galactosidase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) OX=585056 GN=lacZ PE=3 SV=1
Q6D736 1.60e-23 91 434 146 497
Beta-galactosidase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=lacZ PE=3 SV=1
A5F5U6 2.13e-23 102 434 145 484
Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001849 0.981880 0.014620 0.000704 0.000457 0.000457

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002203_00374.