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CAZyme Information: MGYG000002203_00717

You are here: Home > Sequence: MGYG000002203_00717

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes;
CAZyme ID MGYG000002203_00717
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
628 MGYG000002203_6|CGC1 68582.9 4.5681
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002203 2806770 MAG Spain Europe
Gene Location Start: 6058;  End: 7944  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002203_00717.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 211 399 1.2e-79 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 4.71e-06 170 352 48 236
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 6.67e-04 212 288 3 79
Amb_all domain.
pfam00544 Pec_lyase_C 0.008 245 352 55 176
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBK63670.1 1.35e-283 19 627 8 605
ASB47754.1 1.94e-155 141 611 30 464
AXP81340.1 1.06e-149 157 618 41 513
QDH80201.1 5.82e-148 154 613 42 490
AGA79324.1 6.58e-147 154 613 42 490

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.17e-46 159 611 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q5B297 4.10e-45 147 611 11 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q2UB83 1.42e-44 159 611 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q0CLG7 1.07e-40 159 611 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B0XMA2 1.09e-40 159 611 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000078 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002203_00717.