dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002203_02119

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Species

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes;

CAZyme ID

MGYG000002203_02119

CAZy Family

GH33

CAZyme Description

Sialidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
387	MGYG000002203_30\|CGC1	42242.27	6.0996

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002203	2806770	MAG	Spain	Europe

Gene Location

Start: 18174; End: 19337 Strand: -

No EC number prediction in MGYG000002203_02119.

Family	Start	End	Evalue	family coverage
GH33	32	374	6.4e-83	0.9736842105263158

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd15482	Sialidase_non-viral	1.60e-103	33	375	2	339	Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.
pfam13088	BNR_2	1.68e-22	77	356	17	280	BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
COG4409	NanH	6.79e-15	32	362	261	703	Neuraminidase (sialidase) [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis].

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBL05903.1	1.18e-212	20	387	16	385
QQR09640.1	1.84e-99	17	382	26	384
ANU63021.2	3.33e-99	17	382	45	403
ASB38906.1	3.33e-99	17	382	45	403
BCI64112.1	1.07e-97	24	384	22	378

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1EUR_A	3.18e-47	26	379	2	359	Sialidase[Micromonospora viridifaciens],1EUS_A Sialidase Complexed With 2-Deoxy-2,3-Dehydro-N- Acetylneuraminic Acid [Micromonospora viridifaciens]
1EUT_A	2.21e-45	26	379	2	359	Sialidase,Large 68kd Form, Complexed With Galactose [Micromonospora viridifaciens],1EUU_A Sialidase Or Neuraminidase, Large 68kd Form [Micromonospora viridifaciens]
6MNJ_A	2.79e-45	37	361	192	523	Hadzamicrobial sialidase Hz136 [Alistipes],6MNJ_B Hadza microbial sialidase Hz136 [Alistipes]
7LBU_A	4.25e-45	44	379	93	427	ChainA, Exo-alpha-sialidase [Cutibacterium acnes],7LBV_A Chain A, Exo-alpha-sialidase [Cutibacterium acnes]
1WCQ_A	1.06e-44	37	379	13	355	Mutagenesisof the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens],1WCQ_B Mutagenesis of the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens],1WCQ_C Mutagenesis of the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q02834	2.04e-45	18	379	41	401	Sialidase OS=Micromonospora viridifaciens OX=1881 GN=nedA PE=1 SV=1
P31206	1.27e-40	37	361	195	528	Sialidase OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=nanH PE=3 SV=2
P29767	3.15e-26	27	379	377	826	Sialidase OS=Clostridium septicum OX=1504 PE=3 SV=1
Q4WQS0	1.20e-19	19	385	36	406	Exo-alpha-sialidase OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=AFUA_4G13800 PE=1 SV=2
P29768	1.52e-18	37	273	27	265	Sialidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=nanH PE=1 SV=4

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000366	0.998929	0.000210	0.000162	0.000156	0.000148

There is no transmembrane helices in MGYG000002203_02119.