You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002209_00051
You are here: Home > Sequence: MGYG000002209_00051
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; CAG-462; | |||||||||||
| CAZyme ID | MGYG000002209_00051 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 65203; End: 66615 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 72 | 259 | 3.5e-77 | 0.994535519125683 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 2.76e-10 | 21 | 259 | 29 | 273 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 2.75e-07 | 71 | 259 | 2 | 186 | Amb_all domain. |
| pfam18884 | TSP3_bac | 8.73e-05 | 425 | 446 | 1 | 22 | Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues. |
| pfam00544 | Pec_lyase_C | 0.010 | 78 | 259 | 29 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNL41084.1 | 6.72e-179 | 22 | 467 | 58 | 517 |
| QRQ55767.1 | 1.02e-178 | 22 | 467 | 58 | 519 |
| SCV08375.1 | 1.02e-178 | 22 | 467 | 58 | 519 |
| ALJ48957.1 | 1.02e-178 | 22 | 467 | 58 | 519 |
| QUT78076.1 | 1.45e-178 | 22 | 467 | 58 | 519 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6FI2_A | 3.00e-08 | 27 | 238 | 46 | 251 | VexL:A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q5B297 | 5.72e-56 | 12 | 467 | 14 | 410 | Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1 |
| B0XMA2 | 1.14e-54 | 20 | 467 | 21 | 414 | Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1 |
| Q4WL88 | 2.23e-54 | 20 | 467 | 21 | 414 | Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1 |
| Q0CLG7 | 1.16e-53 | 20 | 467 | 20 | 413 | Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1 |
| A1DPF0 | 1.66e-53 | 20 | 467 | 21 | 414 | Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000403 | 0.998889 | 0.000176 | 0.000183 | 0.000160 | 0.000154 |