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CAZyme Information: MGYG000002209_01084

You are here: Home > Sequence: MGYG000002209_01084

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; CAG-462;
CAZyme ID MGYG000002209_01084
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
450 49285.85 7.1254
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002209 3647221 MAG Spain Europe
Gene Location Start: 3598;  End: 4950  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002209_01084.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 74 261 2.7e-64 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.20e-09 5 221 11 236
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 4.37e-08 68 221 3 151
Amb_all domain.
pfam00544 Pec_lyase_C 2.39e-04 111 219 56 174
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AFN75572.1 7.05e-122 7 449 8 472
QQY82329.1 3.68e-115 2 442 3 433
QCD40703.1 1.22e-114 13 443 8 453
QCP73753.1 1.22e-114 13 443 8 453
AKD03745.1 3.55e-114 24 443 52 465

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FI2_A 6.49e-08 29 243 46 252
VexL:A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.64e-54 14 447 8 418
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q4WL88 5.28e-54 12 447 11 419
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q2UB83 1.01e-53 14 447 8 418
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
B0XMA2 1.03e-53 12 447 11 419
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
A1DPF0 1.51e-52 12 447 11 419
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000470 0.998583 0.000323 0.000204 0.000199 0.000172

TMHMM  Annotations      download full data without filtering help

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