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CAZyme Information: MGYG000002209_01238

You are here: Home > Sequence: MGYG000002209_01238

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; CAG-462;
CAZyme ID MGYG000002209_01238
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
578 MGYG000002209_19|CGC1 64231.21 6.5099
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002209 3647221 MAG Spain Europe
Gene Location Start: 8372;  End: 10108  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002209_01238.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 134 327 3.1e-65 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 3.79e-04 132 306 1 166
Amb_all domain.
pfam18884 TSP3_bac 0.005 510 531 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT38401.1 0.0 1 578 1 579
QRQ56886.1 0.0 2 578 3 579
ALJ45257.1 0.0 2 578 3 579
SCV09593.1 0.0 2 578 3 579
QIU95819.1 0.0 1 578 1 579

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 5.69e-51 84 553 22 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 5.78e-50 84 553 23 414
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 8.02e-50 84 553 23 414
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q2UB83 4.03e-49 84 553 22 413
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
A1DPF0 2.11e-48 84 553 23 414
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000467 0.998639 0.000214 0.000260 0.000217 0.000186

TMHMM  Annotations      download full data without filtering help

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