logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002213_00518

You are here: Home > Sequence: MGYG000002213_00518

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; UMGS1872;
CAZyme ID MGYG000002213_00518
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
551 MGYG000002213_18|CGC1 59884.64 4.546
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002213 2465575 MAG Spain Europe
Gene Location Start: 14551;  End: 16206  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002213_00518.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 195 533 3.3e-29 0.8648648648648649

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 1.20e-33 240 532 21 303
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 2.06e-21 282 532 175 408
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
cd06549 GH18_trifunctional 2.96e-19 288 533 79 292
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
pfam00704 Glyco_hydro_18 2.21e-17 268 529 59 302
Glycosyl hydrolases family 18.
smart00636 Glyco_18 1.10e-16 269 529 63 329
Glyco_18 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QAT42616.1 3.75e-189 18 551 23 554
QIB69198.1 3.04e-188 2 551 6 554
QOX64072.1 3.31e-185 2 551 3 564
QHI71217.1 1.71e-182 1 551 5 554
QNL45580.1 1.27e-164 2 535 3 539

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 5.37e-19 284 531 82 308
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
4S3K_A 5.06e-12 321 532 213 413
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O05495 1.10e-18 284 531 174 400
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
P37531 6.95e-15 321 532 209 409
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
P38536 2.69e-11 22 200 1675 1857
Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
C6CRV0 1.77e-10 27 201 1281 1462
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
P38538 1.13e-09 1 143 31 179
Surface layer protein OS=Brevibacillus choshinensis OX=54911 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000406 0.998626 0.000262 0.000238 0.000230 0.000213

TMHMM  Annotations      download full data without filtering help

start end
7 29