logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002219_00782

You are here: Home > Sequence: MGYG000002219_00782

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; UBA1731;
CAZyme ID MGYG000002219_00782
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
666 MGYG000002219_166|CGC1 74552.43 7.9741
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002219 2429287 MAG Peru South America
Gene Location Start: 2036;  End: 4036  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 288 654 6.4e-70 0.9292307692307692
CE12 23 248 1.2e-54 0.9857142857142858

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 4.08e-79 258 661 75 495
Polygalacturonase [Carbohydrate transport and metabolism].
cd01821 Rhamnogalacturan_acetylesterase_like 1.03e-56 23 248 2 196
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
PLN03003 PLN03003 8.90e-15 268 655 26 362
Probable polygalacturonase At3g15720
PLN02218 PLN02218 1.26e-13 268 660 70 422
polygalacturonase ADPG
cd01834 SGNH_hydrolase_like_2 8.66e-12 22 247 2 189
SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQY41723.1 5.41e-143 260 654 47 441
AII65183.1 1.08e-142 260 662 47 449
QUT56858.1 4.48e-134 260 662 46 448
QQY43094.1 4.48e-134 260 662 46 448
QEW35583.1 6.33e-134 260 662 46 448

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 4.69e-132 260 654 39 429
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 5.78e-79 263 660 25 420
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
2O14_A 1.58e-16 23 256 164 365
X-RayCrystal Structure of Protein YXIM_BACsu from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR595 [Bacillus subtilis]
2UVE_A 1.88e-15 268 649 159 565
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
4MXN_A 2.64e-08 261 374 17 121
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 2.06e-29 268 653 65 427
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
O31523 1.98e-25 24 255 8 217
Rhamnogalacturonan acetylesterase RhgT OS=Bacillus subtilis (strain 168) OX=224308 GN=rhgT PE=1 SV=1
O31528 2.58e-21 21 264 2 217
Probable rhamnogalacturonan acetylesterase YesY OS=Bacillus subtilis (strain 168) OX=224308 GN=yesY PE=1 SV=1
P27644 2.95e-17 434 639 30 249
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
P42304 3.86e-16 23 256 179 380
Uncharacterized esterase YxiM OS=Bacillus subtilis (strain 168) OX=224308 GN=yxiM PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000299 0.998913 0.000208 0.000182 0.000185 0.000163

TMHMM  Annotations      download full data without filtering help

start end
5 27