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CAZyme Information: MGYG000002256_00113

You are here: Home > Sequence: MGYG000002256_00113

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA3282;
CAZyme ID MGYG000002256_00113
CAZy Family GT100
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
357 MGYG000002256_1|CGC5 42220.85 6.6536
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002256 2755304 MAG Peru South America
Gene Location Start: 143304;  End: 144377  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002256_00113.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT100 105 322 1.1e-39 0.9144144144144144

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07922 Glyco_transf_52 1.01e-10 115 307 63 236
Glycosyltransferase family 52. This family features glycosyltransferases belonging to glycosyltransferase family 52, which have alpha-2,3- sialyltransferase (EC:4.2.99.4) and alpha-glucosyltransferase (EC 2.4.1.-) activity. For example, beta-galactoside alpha-2,3- sialyltransferase expressed by Neisseria meningitidis is a member of this family and is involved in a step of lipooligosaccharide biosynthesis requiring sialic acid transfer; these lipooligosaccharides are thought to be important in the process of pathogenesis. This family includes several bacterial lipooligosaccharide sialyltransferases similar to the Haemophilus ducreyi LST protein. Haemophilus ducreyi is the cause of the sexually transmitted disease chancroid and produces a lipooligosaccharide (LOS) containing a terminal sialyl N-acetyllactosamine trisaccharide.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNM02131.1 1.75e-151 1 357 1 361
QDB89934.1 3.36e-25 3 339 2 318
SIO74131.1 5.62e-23 6 308 4 281
QBG80608.1 9.53e-23 3 308 2 274
QBG80662.1 9.53e-23 3 308 2 274

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P44066 1.62e-06 128 347 94 298
Uncharacterized protein HI_0871 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0871 PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002256_00113.