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CAZyme Information: MGYG000002270_04183

You are here: Home > Sequence: MGYG000002270_04183

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterococcus_A avium
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus_A; Enterococcus_A avium
CAZyme ID MGYG000002270_04183
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1552 168699.78 9.5636
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002270 4464845 Isolate China Asia
Gene Location Start: 2312;  End: 6970  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002270_04183.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5412 COG5412 2.46e-09 740 1241 1 493
Phage-related protein [Mobilome: prophages, transposons].
COG5412 COG5412 2.34e-07 574 1005 102 494
Phage-related protein [Mobilome: prophages, transposons].
pfam01442 Apolipoprotein 8.80e-07 1030 1190 1 165
Apolipoprotein A1/A4/E domain. These proteins contain several 22 residue repeats which form a pair of alpha helices. This family includes: Apolipoprotein A-I. Apolipoprotein A-IV. Apolipoprotein E.
TIGR02168 SMC_prok_B 1.49e-04 3 308 188 503
chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
COG5185 HEC1 7.23e-04 161 331 307 463
Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCQ10945.1 0.0 1 1552 1 1546
AXG89996.1 1.30e-204 1 1375 1 1245
ACZ64075.1 1.90e-204 1 1375 3 1247
ACZ64141.1 1.90e-204 1 1375 3 1247
QKR90302.1 7.21e-204 1 1375 3 1247

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000065 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
363 385
406 428
952 974
979 1001
1005 1027
1212 1234