You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002273_02156
You are here: Home > Sequence: MGYG000002273_02156
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides stercorirosoris | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides stercorirosoris | |||||||||||
| CAZyme ID | MGYG000002273_02156 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 26923; End: 28422 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 52 | 417 | 6.1e-95 | 0.963076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.56e-88 | 27 | 343 | 83 | 407 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03003 | PLN03003 | 2.55e-34 | 15 | 474 | 10 | 432 | Probable polygalacturonase At3g15720 |
| PLN02793 | PLN02793 | 5.89e-34 | 27 | 403 | 53 | 399 | Probable polygalacturonase |
| pfam00295 | Glyco_hydro_28 | 8.13e-34 | 59 | 371 | 8 | 275 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03010 | PLN03010 | 1.36e-31 | 6 | 423 | 28 | 395 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT88278.1 | 2.67e-311 | 1 | 499 | 1 | 494 |
| ALJ60738.1 | 2.67e-311 | 1 | 499 | 1 | 494 |
| QUT44640.1 | 2.44e-264 | 6 | 491 | 1 | 486 |
| QEK50869.1 | 2.94e-117 | 7 | 474 | 3 | 478 |
| QIH36429.1 | 4.70e-115 | 13 | 467 | 13 | 462 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 3.21e-67 | 28 | 417 | 29 | 429 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 6.33e-53 | 2 | 423 | 17 | 452 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 2UVE_A | 6.16e-21 | 25 | 373 | 155 | 536 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 1BHE_A | 4.29e-20 | 35 | 398 | 19 | 361 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 4MXN_A | 5.78e-12 | 26 | 240 | 16 | 213 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 9.39e-67 | 28 | 398 | 64 | 424 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P27644 | 1.29e-32 | 167 | 387 | 16 | 249 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| P35336 | 9.77e-32 | 28 | 427 | 91 | 453 | Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1 |
| P48978 | 3.72e-30 | 24 | 399 | 96 | 439 | Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1 |
| Q94AJ5 | 5.65e-30 | 28 | 403 | 54 | 399 | Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000252 | 0.998966 | 0.000246 | 0.000177 | 0.000167 | 0.000163 |
