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CAZyme Information: MGYG000002278_01725

You are here: Home > Sequence: MGYG000002278_01725

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_I ramulus_A
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_I; Eubacterium_I ramulus_A
CAZyme ID MGYG000002278_01725
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
972 MGYG000002278_7|CGC2 108236.27 5.396
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002278 3656069 Isolate China Asia
Gene Location Start: 86052;  End: 88970  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002278_01725.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 328 440 2.4e-19 0.9375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 1.02e-18 274 454 50 238
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam01832 Glucosaminidase 1.04e-10 328 394 1 77
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
smart00047 LYZ2 6.02e-08 336 452 24 147
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
COG1705 FlgJ 2.76e-05 307 436 18 174
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
NF033838 PspC_subgroup_1 3.51e-04 617 849 489 682
pneumococcal surface protein PspC, choline-binding form. The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEK17141.1 5.87e-137 136 554 82 494
QOV20091.1 9.76e-113 124 580 62 493
AWY97555.1 8.82e-112 143 553 83 486
QPS13527.1 3.08e-99 136 555 101 516
QMW73215.1 3.08e-99 136 555 101 516

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 1.00e-24 191 452 64 290
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P59205 3.40e-23 191 452 432 658
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1
P59206 3.90e-23 191 452 476 702
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000490 0.998558 0.000343 0.000198 0.000206 0.000179

TMHMM  Annotations      download full data without filtering help

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