CAZyme Information: MGYG000002281_00325

Basic Information

• Species: Bacteroides faecis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides faecis
• CAZyme ID: MGYG000002281_00325
• CAZy Family: PL9
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
535	MGYG000002281_1|CGC8	58166.14	4.9693

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002281	6145961	Isolate	China	Asia

• Gene Location: Start: 466113; End: 467720 Strand: +

Full Sequence      

MKDITKIAYLLLGLILSVPMSAQKTYYMDPEGSDSNPGTSDKPFATLVKVQEVVAAGDVV
YINPGTYVVPADQLPMTTTNSGLYHCVFHLNKSGEAGKPISYLANPNRQGRPVFDLSQVK
PKDQRITVFYVTGSNLYLKGFDVIGTQVTITDHTQSECFRIVKGANNNKFEDLRTHDGMA
IGFYLLGGSNNHILNCDAYNNYDSVSEGGKGGNVDGFGGHINSSSAGEGKGTGNVFEGCR
AWYNSDDGFDLINCFEAVKIINCWSFLNGYKPGTKEAAGDGTGFKAGGYGMSADNLPATP
DIIPQHEVRNSLAYYNRLRGFYANHHLGGIIFESNTAVNSGENYNMTNRELPLALPPTDV
SGYDHIIKNNLSFVSRSGSKHIVTVNRAKSEVSNNSFDGSEEVVEADFISLEEAELMRDR
KPNGDLPDVNFGKLTTDAELRFWGMGCFATGEPTDLDFGWLKKPTIVVVGSKASVVGPEA
ALFTKMYVIVDGEETVEFDKNSIDLSDFSGVLEVKAVIEDANGNVTKSIAFKFKR

Enzyme Prediction     

EC	4.2.2.23

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL9	21	440	9.3e-107	0.9625668449197861

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16380	DUF4990	3.42e-100	386	527	1	142	Domain of unknown function. This family around 150 residues locates in the C-terminal of some uncharacterized proteins in various Bacteroides species. The function of this family remains unknown.
pfam13229	Beta_helix	2.33e-05	161	336	4	157	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam07602	DUF1565	0.001	32	67	3	38	Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ALJ43466.1	0.0	1	535	1	535
QMW86514.1	0.0	1	535	1	535
AAO79275.1	0.0	1	535	1	535
QQA07693.1	0.0	1	535	1	535
BCA48715.1	0.0	1	535	1	535

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5OLQ_A	0.0	24	535	3	514	Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]
1RU4_A	2.17e-45	16	440	7	375	ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P0C1A6	5.57e-46	16	440	32	400	Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7	2.01e-44	16	440	32	400	Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
P22751	3.70e-06	18	387	383	680	Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000967	0.995702	0.002691	0.000208	0.000199	0.000192

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002281_00325.