You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002283_02267
You are here: Home > Sequence: MGYG000002283_02267
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacillus_A paranthracis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae_G; Bacillus_A; Bacillus_A paranthracis | |||||||||||
| CAZyme ID | MGYG000002283_02267 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | Spore protein YkvP | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 2172462; End: 2173655 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4641 | COG4641 | 1.17e-52 | 1 | 329 | 32 | 373 | Spore maturation protein CgeB [Cell cycle control, cell division, chromosome partitioning]. |
| pfam13524 | Glyco_trans_1_2 | 4.66e-24 | 225 | 316 | 1 | 93 | Glycosyl transferases group 1. |
| pfam01476 | LysM | 3.12e-10 | 350 | 391 | 1 | 42 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
| COG1388 | LysM | 2.77e-09 | 342 | 394 | 61 | 113 | LysM repeat [Cell wall/membrane/envelope biogenesis]. |
| cd00118 | LysM | 3.08e-09 | 350 | 391 | 3 | 45 | Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASI78848.1 | 4.64e-298 | 1 | 397 | 1 | 397 |
| QWI25599.1 | 2.98e-269 | 1 | 397 | 1 | 397 |
| QED49909.1 | 9.22e-175 | 1 | 393 | 1 | 393 |
| AKI91831.1 | 7.88e-143 | 1 | 394 | 1 | 389 |
| QHJ98555.1 | 4.51e-142 | 1 | 394 | 1 | 389 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O31681 | 1.81e-142 | 1 | 394 | 1 | 389 | Spore protein YkvP OS=Bacillus subtilis (strain 168) OX=224308 GN=ykvP PE=2 SV=1 |
| Q6GJK9 | 2.21e-06 | 350 | 391 | 29 | 70 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=sle1 PE=3 SV=1 |
| Q6GC24 | 2.21e-06 | 350 | 391 | 29 | 70 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=sle1 PE=3 SV=1 |
| Q5HIL2 | 2.21e-06 | 350 | 391 | 29 | 70 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain COL) OX=93062 GN=sle1 PE=3 SV=1 |
| Q7A1T4 | 2.21e-06 | 350 | 391 | 29 | 70 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=sle1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000059 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |