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CAZyme Information: MGYG000002287_00173
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Agathobaculum sp003481705 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Butyricicoccaceae; Agathobaculum; Agathobaculum sp003481705 | |||||||||||
| CAZyme ID | MGYG000002287_00173 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 189941; End: 196432 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 1.12e-77 | 871 | 1397 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 6.71e-28 | 1540 | 1729 | 441 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| cd18011 | DEXDc_RapA | 7.10e-11 | 1343 | 1591 | 1 | 173 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| cd17919 | DEXHc_Snf | 2.49e-10 | 1343 | 1610 | 1 | 173 | DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins. Sucrose Non-Fermenting (SNF) proteins DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| COG0827 | YtxK | 3.34e-09 | 711 | 854 | 211 | 344 | Adenine-specific DNA methylase [Replication, recombination and repair]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AEY69616.1 | 0.0 | 586 | 2145 | 1696 | 3344 |
| ASV45029.1 | 0.0 | 573 | 2146 | 1542 | 3188 |
| QIW86704.1 | 0.0 | 573 | 2142 | 1610 | 3265 |
| QIW86628.1 | 0.0 | 573 | 2142 | 1610 | 3265 |
| AXF51455.1 | 0.0 | 586 | 2145 | 1789 | 3437 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 4.89e-34 | 645 | 1947 | 70 | 1600 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000047 | 0.000008 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |