CAZyme Information: MGYG000002290_02804

Basic Information

• Species: Sellimonas sp002161525
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Sellimonas; Sellimonas sp002161525
• CAZyme ID: MGYG000002290_02804
• CAZy Family: GH13
• CAZyme Description: 1,4-alpha-glucan branching enzyme GlgB

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
637	MGYG000002290_20|CGC1	74379.33	6.5837

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002290	3837069	Isolate	China	Asia

• Gene Location: Start: 18220; End: 20133 Strand: -

Full Sequence      

MARTKKKKPYEIGELDQYLFGQGTHYDLYKKMGSHLVTDGRRKGAYFAVWAPNAKAVSVV
GDFNNWDKDKNPMVREEPLGIYTCFIQGIEEDMIYKYCIETKTGDFLYKADPFANYAEVR
PGTASKVHDISNLKWSDSAWMEKRTTWNMDESPMSIYEAHIGSWKQHPGEEEERFYNYRE
FAVEAAKYMKEMGYTHIELMGIAEHPYDGSWGYQVTGYFAPTSRYGTPEDFAYMINYFHK
NKIGVILDWVPAHFPRDAHGLADFDGTAVYEYADPRKGEHPDWGTKIFDYGKSEVKNFLI
SNALFWMEHFHVDGLRVDAVASMLYLDYGKQDGQWVANKYGGNQNLEAIEFFKHLNSVVL
GRNPGAVMIAEESTAWPKVTGKPEDDGLGFSLKWNMGWMHDFLEYMKLDPYFRKEHHNQM
TFAMTYAYSEKYVLVLSHDEVVHLKCSMLNKMPGLGFDKYANLKVGYAFMMGHPGKKLLF
MGQDFAQLREWSEERELDWYLLEEPEHQYLQAFTRDLLKLYKKNKAMYEQDTVGYGFEWV
NANDGYRSIFSFIRHSRNNKKNLLFVCNFTPMEWADYRVGVPRRKQYKLILNSDEKQYGG
KGEERPLVYKAVKQECDGRPYSFAYKLPPYGVAVFEF

Enzyme Prediction     

EC	2.4.1.18

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH13	188	487	1.2e-151	0.9933554817275747

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK05402	PRK05402	0.0	12	636	100	722	1,4-alpha-glucan branching protein GlgB.
PRK14706	PRK14706	0.0	32	637	27	621	glycogen branching enzyme; Provisional
PRK12313	PRK12313	0.0	14	637	9	627	1,4-alpha-glucan branching protein GlgB.
PRK14705	PRK14705	0.0	9	635	596	1220	glycogen branching enzyme; Provisional
COG0296	GlgB	0.0	12	636	6	627	1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUO31484.1	0.0	1	637	1	637
QYX26973.1	0.0	5	637	4	636
QBF73616.1	0.0	5	637	4	636
QRO36928.1	0.0	5	637	4	636
QRT48547.1	0.0	6	637	48	681

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GQW_A	1.65e-227	9	636	127	772	Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A	2.33e-227	9	636	127	772	Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GR2_A	3.30e-227	9	636	127	772	Crystalstructure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GR4_A Crystal structure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GQZ_A	3.30e-227	9	636	127	772	Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A	4.67e-227	9	636	127	772	Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P30539	5.90e-294	12	637	7	632	1,4-alpha-glucan branching enzyme GlgB OS=Butyrivibrio fibrisolvens OX=831 GN=glgB PE=1 SV=1
Q7NL20	5.48e-234	12	636	103	727	1,4-alpha-glucan branching enzyme GlgB OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=glgB PE=3 SV=1
Q8DLB8	2.35e-233	11	636	105	749	1,4-alpha-glucan branching enzyme GlgB OS=Thermosynechococcus vestitus (strain IAM M-273 / NIES-2133 / BP-1) OX=197221 GN=glgB PE=3 SV=1
Q1AZ86	7.04e-232	9	629	96	711	1,4-alpha-glucan branching enzyme GlgB OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=glgB PE=3 SV=1
A1U0K1	4.10e-231	12	634	6	626	1,4-alpha-glucan branching enzyme GlgB OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000061	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002290_02804.