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CAZyme Information: MGYG000002291_01048

You are here: Home > Sequence: MGYG000002291_01048

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species OM05-12 sp003438995
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; OM05-12; OM05-12 sp003438995
CAZyme ID MGYG000002291_01048
CAZy Family PL38
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
357 MGYG000002291_4|CGC1 41439.13 7.7935
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002291 4475595 Isolate China Asia
Gene Location Start: 76130;  End: 77203  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002291_01048.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL38 145 293 5.4e-18 0.5483870967741935

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05426 Alginate_lyase 9.67e-42 79 293 44 274
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT50612.1 2.01e-162 1 357 1 359
BAM95908.1 3.58e-66 4 353 14 372
BAM95907.1 1.60e-54 34 352 43 376
QCP58556.1 7.10e-14 77 297 108 350
ARB85706.1 8.18e-14 77 295 137 377

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000775 0.998104 0.000544 0.000191 0.000188 0.000182

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002291_01048.