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CAZyme Information: MGYG000002293_00946

You are here: Home > Sequence: MGYG000002293_00946

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900557255
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900557255
CAZyme ID MGYG000002293_00946
CAZy Family PL17
CAZyme Description Exo-oligoalginate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
732 MGYG000002293_7|CGC3 82971.12 6.9478
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002293 3611909 Isolate China Asia
Gene Location Start: 106062;  End: 108260  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002293_00946.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL17 386 523 1.4e-45 0.9712230215827338
PL17 187 266 2.9e-24 0.6240601503759399

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 3.56e-16 377 547 3 159
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam05426 Alginate_lyase 4.81e-16 49 306 15 274
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT66845.1 0.0 1 732 1 732
QNL39960.1 0.0 1 728 1 732
QIU93441.1 6.89e-318 1 728 1 732
QUT26278.1 6.20e-317 1 728 1 732
EGN08295.1 6.20e-317 1 728 1 732

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4NEI_A 1.77e-177 22 724 30 727
Alg17cPL17 Family Alginate Lyase [Saccharophagus degradans 2-40],4NEI_B Alg17c PL17 Family Alginate Lyase [Saccharophagus degradans 2-40]
4OJZ_A 3.96e-176 22 724 30 727
CrystalStructure of Alg17c Mutant Y258A Complexed with Alginate Trisaccharide [Saccharophagus degradans 2-40],4OJZ_B Crystal Structure of Alg17c Mutant Y258A Complexed with Alginate Trisaccharide [Saccharophagus degradans 2-40],4OK2_A Crystal Structure of Alg17c Mutant Y258A [Saccharophagus degradans 2-40],4OK2_B Crystal Structure of Alg17c Mutant Y258A [Saccharophagus degradans 2-40]
4OK4_A 7.90e-176 22 724 30 727
CrystalStructure of Alg17c Mutant H202L [Saccharophagus degradans 2-40],4OK4_B Crystal Structure of Alg17c Mutant H202L [Saccharophagus degradans 2-40]
7BJT_A 1.77e-175 6 724 12 743
ChainA, Alginate lyase, family PL17 [Zobellia galactanivorans],7BJT_B Chain B, Alginate lyase, family PL17 [Zobellia galactanivorans]
7BM6_A 3.96e-174 6 724 12 743
ChainA, Alginate lyase, family PL17 [Zobellia galactanivorans],7BM6_B Chain B, Alginate lyase, family PL17 [Zobellia galactanivorans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q21FJ0 9.68e-177 22 724 30 727
Exo-oligoalginate lyase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=alg17C PE=1 SV=1
B2FSW8 2.29e-167 17 724 32 729
Alginate lyase OS=Stenotrophomonas maltophilia (strain K279a) OX=522373 GN=Smlt2602 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000192 0.999185 0.000156 0.000151 0.000146 0.000138

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002293_00946.