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CAZyme Information: MGYG000002302_00588

You are here: Home > Sequence: MGYG000002302_00588

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus vestibularis
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus vestibularis
CAZyme ID MGYG000002302_00588
CAZy Family GT0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
547 MGYG000002302_5|CGC2 63842.75 5.5868
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002302 1897565 Isolate China Asia
Gene Location Start: 50904;  End: 52547  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002302_00588.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05045 RgpF 2.06e-94 34 412 1 407
Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.
COG3754 RgpF 1.58e-88 1 414 1 429
Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QBS00320.1 8.11e-113 1 428 1 432
QBS00422.1 8.11e-113 1 428 1 432
SQF75473.1 8.11e-113 1 428 1 432
SQF25488.1 1.14e-112 1 428 1 432
QAU29220.1 4.52e-112 1 428 1 432

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P55470 1.63e-11 23 190 99 264
Uncharacterized protein y4gN OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03500 PE=4 SV=1
F7YJG6 1.33e-08 56 207 81 225
Virulence protein VirA OS=Vibrio anguillarum (strain ATCC 68554 / 775) OX=882102 GN=virA PE=4 SV=2
P0DJH1 1.33e-08 56 207 81 225
Virulence protein VirA OS=Vibrio anguillarum OX=55601 GN=virA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002302_00588.