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CAZyme Information: MGYG000002309_00812

You are here: Home > Sequence: MGYG000002309_00812

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Kurthia senegalensis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_A; Planococcaceae; Kurthia; Kurthia senegalensis
CAZyme ID MGYG000002309_00812
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1019 MGYG000002309_10|CGC1 110655.7 10.2789
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002309 2976740 Isolate Senegal Africa
Gene Location Start: 11640;  End: 14699  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002309_00812.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 719 829 8.3e-20 0.9609375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01832 Glucosaminidase 2.43e-12 719 788 2 82
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
COG4193 LytD 5.83e-09 679 833 68 230
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 4.94e-05 723 833 21 147
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
COG1705 FlgJ 7.63e-05 716 762 49 95
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
NF033202 GW_glycos_SH3 3.49e-04 39 111 9 80
GW domain. The GW domain of Listeria belongs to the clan of SH3-like domains. A similar but broader model (PF13457) occurs in Pfam. The GW domain occurs as repeats on surface proteins of the cell-invading pathogenic bacterium Listeria monocytogenes, and is involved in binding to glycosaminoglycans. Members of this family include the GW-type internalin InlB and several paralogs.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AMA63834.1 6.03e-148 173 1016 7 846
VEI05048.1 1.45e-145 173 1019 7 863
AMX00942.1 2.39e-112 183 1018 18 735
QOV10422.1 1.17e-109 203 946 32 781
AMX00941.1 9.12e-81 521 1018 28 519

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 5.22e-14 677 823 134 276
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7X0T9 1.38e-22 42 819 449 1228
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=atl PE=3 SV=2
Q931U5 1.38e-22 42 819 442 1221
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
P0C5Z8 1.38e-22 42 819 449 1228
Bifunctional autolysin OS=Staphylococcus aureus OX=1280 GN=atl PE=1 SV=1
Q99V41 1.38e-22 42 819 442 1221
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
Q8CPQ1 5.60e-22 42 819 543 1308
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000280 0.999025 0.000162 0.000188 0.000169 0.000146

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002309_00812.