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CAZyme Information: MGYG000002310_00615
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Microvirga massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Microvirga; Microvirga massiliensis | |||||||||||
| CAZyme ID | MGYG000002310_00615 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Beta-glucosidase BoGH3B | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 628014; End: 630302 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 103 | 320 | 2.3e-66 | 0.9907407407407407 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK15098 | PRK15098 | 0.0 | 9 | 726 | 6 | 751 | beta-glucosidase BglX. |
| COG1472 | BglX | 2.37e-82 | 56 | 417 | 1 | 365 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| PLN03080 | PLN03080 | 5.00e-78 | 1 | 726 | 3 | 769 | Probable beta-xylosidase; Provisional |
| pfam00933 | Glyco_hydro_3 | 1.15e-77 | 57 | 352 | 1 | 316 | Glycosyl hydrolase family 3 N terminal domain. |
| pfam01915 | Glyco_hydro_3_C | 6.20e-65 | 390 | 623 | 1 | 216 | Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QFU18209.1 | 0.0 | 37 | 755 | 4 | 720 |
| ANY79253.1 | 0.0 | 37 | 755 | 24 | 742 |
| QRM29879.1 | 0.0 | 41 | 762 | 32 | 751 |
| ACL57267.1 | 3.29e-257 | 41 | 741 | 19 | 724 |
| QDI81127.1 | 2.56e-256 | 32 | 749 | 15 | 737 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6R5I_A | 1.46e-168 | 46 | 726 | 4 | 719 | ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1] |
| 6R5P_A | 3.86e-168 | 16 | 726 | 15 | 751 | ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1] |
| 6R5O_A | 8.20e-168 | 46 | 726 | 4 | 719 | ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1] |
| 6R5R_A | 8.46e-168 | 46 | 726 | 5 | 720 | ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1] |
| 5XXL_A | 4.78e-158 | 49 | 742 | 14 | 754 | Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q56078 | 3.04e-170 | 22 | 729 | 13 | 754 | Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2 |
| P33363 | 1.50e-167 | 25 | 739 | 16 | 764 | Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2 |
| T2KMH0 | 3.06e-116 | 42 | 740 | 30 | 721 | Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1 |
| A7LXU3 | 3.13e-100 | 32 | 726 | 22 | 762 | Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1 |
| T2KMH9 | 1.45e-92 | 45 | 730 | 36 | 745 | Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001894 | 0.997012 | 0.000405 | 0.000248 | 0.000217 | 0.000205 |