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CAZyme Information: MGYG000002311_00745
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Vibrio cholerae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio cholerae | |||||||||||
| CAZyme ID | MGYG000002311_00745 | |||||||||||
| CAZy Family | GH18 | |||||||||||
| CAZyme Description | Chitodextrinase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 817472; End: 820651 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH18 | 356 | 813 | 1.5e-68 | 0.9695945945945946 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3325 | ChiA | 5.44e-179 | 342 | 805 | 24 | 425 | Chitinase, GH18 family [Carbohydrate transport and metabolism]. |
| cd06548 | GH18_chitinase | 1.84e-98 | 358 | 803 | 1 | 322 | The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. |
| smart00636 | Glyco_18 | 2.37e-95 | 357 | 803 | 1 | 334 | Glyco_18 domain. |
| pfam06483 | ChiC | 5.46e-74 | 812 | 984 | 1 | 174 | Chitinase C. This ~170 aa region is found at the C-terminus of pfam00704. |
| pfam00704 | Glyco_hydro_18 | 1.47e-72 | 357 | 803 | 1 | 307 | Glycosyl hydrolases family 18. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| SPM13763.1 | 0.0 | 1 | 1059 | 1 | 1059 |
| ARB81256.1 | 0.0 | 1 | 1059 | 30 | 1088 |
| SPM21684.1 | 0.0 | 1 | 1059 | 1 | 1059 |
| BBE13859.1 | 0.0 | 1 | 1059 | 1 | 1059 |
| QJS93699.1 | 0.0 | 1 | 1059 | 13 | 1071 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4TXG_A | 1.01e-218 | 296 | 981 | 84 | 788 | CrystalStructure of a Family GH18 Chitinase from Chromobacterium violaceum [Chromobacterium violaceum ATCC 12472] |
| 1ITX_A | 1.13e-51 | 357 | 803 | 13 | 406 | ChainA, Glycosyl Hydrolase [Niallia circulans] |
| 6BT9_A | 3.16e-48 | 345 | 803 | 23 | 448 | ChitinaseChiA74 from Bacillus thuringiensis [Bacillus thuringiensis],6BT9_B Chitinase ChiA74 from Bacillus thuringiensis [Bacillus thuringiensis] |
| 6KST_A | 2.55e-46 | 357 | 803 | 8 | 357 | Crystalstructure of the catalytic domain of chitinase ChiL from Chitiniphilus shinanonensis (CsChiL) [Chitiniphilus shinanonensis],6KST_B Crystal structure of the catalytic domain of chitinase ChiL from Chitiniphilus shinanonensis (CsChiL) [Chitiniphilus shinanonensis],6KXL_A Crystal structure of the catalytic domain of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis],6KXL_B Crystal structure of the catalytic domain of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis] |
| 6KXM_A | 1.17e-45 | 357 | 803 | 8 | 357 | Crystalstructure of D157N mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis],6KXM_B Crystal structure of D157N mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P96156 | 8.24e-217 | 122 | 1038 | 85 | 1023 | Chitodextrinase OS=Vibrio furnissii OX=29494 GN=endo I PE=1 SV=1 |
| P20533 | 9.56e-49 | 357 | 803 | 45 | 438 | Chitinase A1 OS=Niallia circulans OX=1397 GN=chiA1 PE=1 SV=1 |
| P32823 | 6.02e-33 | 355 | 1056 | 156 | 818 | Chitinase A OS=Pseudoalteromonas piscicida OX=43662 GN=chiA PE=1 SV=1 |
| P11797 | 9.33e-32 | 355 | 803 | 14 | 408 | Chitinase B OS=Serratia marcescens OX=615 GN=chiB PE=1 SV=1 |
| G5EAZ3 | 3.17e-26 | 357 | 848 | 5 | 389 | Endochitinase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=chiB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.997688 | 0.002325 | 0.000017 | 0.000006 | 0.000003 | 0.000006 |