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CAZyme Information: MGYG000002311_01583
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Vibrio cholerae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio cholerae | |||||||||||
| CAZyme ID | MGYG000002311_01583 | |||||||||||
| CAZy Family | CBM73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1783464; End: 1786004 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH18 | 521 | 742 | 8.9e-21 | 0.597972972972973 |
| CBM73 | 279 | 327 | 2.2e-19 | 0.9444444444444444 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3469 | Chi1 | 2.96e-156 | 524 | 846 | 28 | 332 | Chitinase [Carbohydrate transport and metabolism]. |
| cd02871 | GH18_chitinase_D-like | 5.11e-143 | 522 | 838 | 1 | 312 | GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus. |
| COG3979 | COG3979 | 2.99e-30 | 1 | 191 | 8 | 181 | Chitodextrinase [Carbohydrate transport and metabolism]. |
| pfam00704 | Glyco_hydro_18 | 1.10e-19 | 523 | 824 | 1 | 307 | Glycosyl hydrolases family 18. |
| cd12215 | ChiC_BD | 5.07e-12 | 29 | 68 | 1 | 40 | Chitin-binding domain of chitinase C. Chitin-binding domain of chitinase C (ChiC) of Streptomyces griseus and related proteins. Chitinase C is a family 19 chitinase, and consists of a N-terminal chitin binding domain and a C-terminal chitin-catalytic domain that effects degradation. Chitinases function in invertebrates in the degradation of old exoskeletons, in fungi to utilize chitin in cell walls, and in bacteria which use chitin as an energy source. ChiC contains the characteristic chitin-binding aromatic residues. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QJS91957.1 | 0.0 | 1 | 846 | 1 | 846 |
| QLK89809.1 | 0.0 | 1 | 846 | 1 | 846 |
| ALJ63639.1 | 0.0 | 1 | 846 | 1 | 846 |
| AKA00396.1 | 0.0 | 1 | 846 | 1 | 846 |
| QTV01213.1 | 0.0 | 1 | 846 | 1 | 846 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4TX8_A | 1.82e-109 | 521 | 842 | 106 | 420 | CrystalStructure of a Family GH18 Chitinase from Chromobacterium violaceum [Chromobacterium violaceum ATCC 12472] |
| 5KZ6_A | 9.45e-64 | 524 | 832 | 12 | 322 | 1.25Angstrom Crystal Structure of Chitinase from Bacillus anthracis. [Bacillus anthracis],5KZ6_B 1.25 Angstrom Crystal Structure of Chitinase from Bacillus anthracis. [Bacillus anthracis] |
| 3N11_A | 4.39e-63 | 524 | 832 | 9 | 319 | Crystalstricture of wild-type chitinase from Bacillus cereus NCTU2 [Bacillus cereus],3N12_A Crystal stricture of chitinase in complex with zinc atoms from Bacillus cereus NCTU2 [Bacillus cereus] |
| 3N15_A | 1.16e-62 | 524 | 832 | 9 | 319 | Crystalstricture of E145Q chitinase in complex with NAG from Bacillus cereus NCTU2 [Bacillus cereus] |
| 3N17_A | 4.25e-62 | 524 | 832 | 9 | 319 | Crystalstricture of E145Q/Y227F chitinase in complex with NAG from Bacillus cereus NCTU2 [Bacillus cereus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P27050 | 1.29e-61 | 446 | 832 | 109 | 504 | Chitinase D OS=Niallia circulans OX=1397 GN=chiD PE=1 SV=4 |
| Q05638 | 1.03e-59 | 522 | 833 | 264 | 590 | Exochitinase 1 OS=Streptomyces olivaceoviridis OX=1921 GN=chi01 PE=1 SV=1 |
| D4AVJ0 | 1.48e-53 | 541 | 834 | 17 | 323 | Probable class II chitinase ARB_00204 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_00204 PE=1 SV=2 |
| A5FB63 | 6.92e-47 | 333 | 824 | 930 | 1462 | Chitinase ChiA OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=chiA PE=1 SV=1 |
| P96156 | 7.92e-40 | 10 | 235 | 18 | 248 | Chitodextrinase OS=Vibrio furnissii OX=29494 GN=endo I PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000417 | 0.998226 | 0.000772 | 0.000226 | 0.000175 | 0.000156 |