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CAZyme Information: MGYG000002311_02932
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Vibrio cholerae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio cholerae | |||||||||||
| CAZyme ID | MGYG000002311_02932 | |||||||||||
| CAZy Family | GH18 | |||||||||||
| CAZyme Description | Chitodextrinase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 199164; End: 202319 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH18 | 319 | 779 | 5.3e-72 | 0.9459459459459459 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3325 | ChiA | 2.21e-175 | 303 | 784 | 22 | 431 | Chitinase, GH18 family [Carbohydrate transport and metabolism]. |
| cd06548 | GH18_chitinase | 1.62e-104 | 321 | 776 | 1 | 322 | The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. |
| smart00636 | Glyco_18 | 1.22e-93 | 320 | 776 | 1 | 334 | Glyco_18 domain. |
| pfam06483 | ChiC | 1.23e-86 | 804 | 969 | 1 | 165 | Chitinase C. This ~170 aa region is found at the C-terminus of pfam00704. |
| pfam00704 | Glyco_hydro_18 | 6.94e-69 | 320 | 776 | 1 | 307 | Glycosyl hydrolases family 18. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AIT31561.1 | 0.0 | 1 | 1051 | 1 | 1051 |
| AKO76902.1 | 0.0 | 1 | 1051 | 1 | 1051 |
| ALJ65992.1 | 0.0 | 1 | 1051 | 1 | 1051 |
| AJZ98197.1 | 0.0 | 1 | 1051 | 1 | 1051 |
| AVH53850.1 | 0.0 | 1 | 1051 | 1 | 1051 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4TXG_A | 1.13e-278 | 284 | 971 | 119 | 788 | CrystalStructure of a Family GH18 Chitinase from Chromobacterium violaceum [Chromobacterium violaceum ATCC 12472] |
| 6KST_A | 8.71e-48 | 320 | 776 | 8 | 357 | Crystalstructure of the catalytic domain of chitinase ChiL from Chitiniphilus shinanonensis (CsChiL) [Chitiniphilus shinanonensis],6KST_B Crystal structure of the catalytic domain of chitinase ChiL from Chitiniphilus shinanonensis (CsChiL) [Chitiniphilus shinanonensis],6KXL_A Crystal structure of the catalytic domain of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis],6KXL_B Crystal structure of the catalytic domain of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis] |
| 6KXM_A | 4.02e-47 | 320 | 776 | 8 | 357 | Crystalstructure of D157N mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis],6KXM_B Crystal structure of D157N mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis] |
| 1ITX_A | 4.85e-47 | 320 | 776 | 13 | 406 | ChainA, Glycosyl Hydrolase [Niallia circulans] |
| 6KXN_A | 6.29e-46 | 320 | 776 | 8 | 357 | Crystalstructure of W50A mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis],6KXN_B Crystal structure of W50A mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P96156 | 0.0 | 1 | 1049 | 1 | 1046 | Chitodextrinase OS=Vibrio furnissii OX=29494 GN=endo I PE=1 SV=1 |
| P20533 | 4.57e-45 | 320 | 894 | 45 | 536 | Chitinase A1 OS=Niallia circulans OX=1397 GN=chiA1 PE=1 SV=1 |
| P32470 | 1.09e-33 | 309 | 647 | 30 | 326 | Chitinase 1 OS=Aphanocladium album OX=12942 GN=CHI1 PE=1 SV=2 |
| A6N6J0 | 2.64e-31 | 324 | 776 | 44 | 390 | Endochitinase 46 OS=Trichoderma harzianum OX=5544 GN=chit46 PE=1 SV=1 |
| P32823 | 3.59e-30 | 318 | 776 | 156 | 573 | Chitinase A OS=Pseudoalteromonas piscicida OX=43662 GN=chiA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001987 | 0.561172 | 0.435140 | 0.000971 | 0.000406 | 0.000293 |