logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002323_00888

You are here: Home > Sequence: MGYG000002323_00888

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Escherichia sp000208585
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia sp000208585
CAZyme ID MGYG000002323_00888
CAZy Family GH104
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
158 MGYG000002323_3|CGC7 17818.19 9.3083
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002323 4514939 Isolate not provided not provided
Gene Location Start: 488533;  End: 489009  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.N1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH104 4 149 6.9e-64 0.9793103448275862

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4678 COG4678 1.93e-80 1 153 18 178
Muramidase (phage lambda lysozyme) [Cell wall/membrane/envelope biogenesis, Mobilome: prophages, transposons].
cd00736 lambda_lys-like 3.61e-80 6 151 1 141
Bacteriophage lambda lysozyme and similar proteins. Lysozyme from bacteriophage lambda hydrolyzes the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc), as do other lysozymes. However, unlike other lysozymes, bacteriophage lambda does not produce a reducing end upon cleavage of the peptidoglycan, but rather uses the 6-OH of the same MurNAc residue to produce a 1,6-anhydromuramic acid terminal residue and is therefore a lytic transglycosylase. An identical 1,6-anhydro bond is formed in bacterial peptidoglycans by the action of the lytic transglycosylases of E. coli, though they differ structurally.
pfam00959 Phage_lysozyme 4.45e-27 33 138 1 105
Phage lysozyme. This family includes lambda phage lysozyme and E. coli endolysin.
cd00442 Lyz-like 1.14e-05 55 98 16 59
lysozyme-like domains. This family contains several members, including soluble lytic transglycosylases (SLT), goose egg-white lysozymes (GEWL), hen egg-white lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, chitosanases, and pesticin. Typical members are involved in the hydrolysis of beta-1,4- linked polysaccharides.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIF19852.1 3.98e-116 1 158 1 158
AMU80905.1 3.98e-116 1 158 1 158
AUL64984.1 3.98e-116 1 158 1 158
AVS05303.1 3.98e-116 1 158 1 158
AXT77618.1 6.62e-115 1 158 1 158

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1D9U_A 3.91e-103 1 153 1 153
ChainA, Bacteriophage Lambda Lysozyme [Lambdavirus lambda],1D9U_B Chain B, Bacteriophage Lambda Lysozyme [Lambdavirus lambda],3D3D_A Chain A, Lysozyme [Lambdavirus lambda],3D3D_B Chain B, Lysozyme [Lambdavirus lambda]
1AM7_A 1.96e-97 1 158 1 158
ChainA, LYSOZYME [Lambdavirus lambda],1AM7_B Chain B, LYSOZYME [Lambdavirus lambda],1AM7_C Chain C, LYSOZYME [Lambdavirus lambda]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P03706 5.16e-104 1 158 1 158
Endolysin OS=Escherichia phage lambda OX=10710 GN=R PE=1 SV=1
P51771 2.90e-49 1 152 1 163
Endolysin OS=Escherichia phage P2 OX=10679 GN=K PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000060 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002323_00888.