logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002324_01300

You are here: Home > Sequence: MGYG000002324_01300

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ligilactobacillus salivarius
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Ligilactobacillus; Ligilactobacillus salivarius
CAZyme ID MGYG000002324_01300
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
476 MGYG000002324_1|CGC14 54132.82 4.7854
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002324 1978364 Isolate China Asia
Gene Location Start: 1284554;  End: 1285984  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002324_01300.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 2 473 9.2e-178 0.9957627118644068

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0297 GlgA 0.0 1 476 1 479
Glycogen synthase [Carbohydrate transport and metabolism].
TIGR02095 glgA 0.0 1 475 1 473
glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
PRK00654 glgA 0.0 1 476 1 464
glycogen synthase GlgA.
cd03791 GT5_Glycogen_synthase_DULL1-like 0.0 2 472 1 472
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
PRK14099 PRK14099 7.33e-107 1 476 4 480
glycogen synthase GlgA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP35791.1 0.0 1 476 1 476
QXL49057.1 0.0 1 476 1 476
AKI04772.1 0.0 1 476 1 476
AYC10472.1 0.0 1 476 1 476
ATP36872.1 0.0 1 476 1 476

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3D1J_A 5.18e-88 1 475 1 476
ChainA, Glycogen synthase [Escherichia coli]
2QZS_A 1.81e-87 1 475 1 476
CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12]
3COP_A 1.41e-86 1 475 1 476
ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli]
4HLN_A 5.54e-86 2 472 126 622
Structureof barley starch synthase I in complex with maltooligosaccharide [Hordeum vulgare]
1RZU_A 1.23e-71 1 476 1 476
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1WSN1 0.0 1 476 1 476
Glycogen synthase OS=Ligilactobacillus salivarius (strain UCC118) OX=362948 GN=glgA PE=3 SV=1
Q5FL65 7.91e-210 1 476 1 475
Glycogen synthase OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) OX=272621 GN=glgA PE=3 SV=1
Q8E5V5 7.21e-201 1 475 1 475
Glycogen synthase OS=Streptococcus agalactiae serotype III (strain NEM316) OX=211110 GN=glgA PE=3 SV=1
Q3K1K2 2.92e-200 1 475 1 475
Glycogen synthase OS=Streptococcus agalactiae serotype Ia (strain ATCC 27591 / A909 / CDC SS700) OX=205921 GN=glgA PE=3 SV=1
Q8E079 2.92e-200 1 475 1 475
Glycogen synthase OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R) OX=208435 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002324_01300.