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CAZyme Information: MGYG000002325_00039

You are here: Home > Sequence: MGYG000002325_00039

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Listeria monocytogenes_B
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Listeriaceae; Listeria; Listeria monocytogenes_B
CAZyme ID MGYG000002325_00039
CAZy Family GH9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
800 MGYG000002325_1|CGC2 90965.77 4.8898
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002325 3017944 Isolate Canada North America
Gene Location Start: 39716;  End: 42118  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002325_00039.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH9 314 740 1.7e-35 0.8444976076555024

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02850 E_set_Cellulase_N 6.20e-16 223 303 2 86
N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.
pfam02927 CelD_N 2.75e-09 229 292 9 77
Cellulase N-terminal ig-like domain.
pfam00759 Glyco_hydro_9 0.002 316 413 5 111
Glycosyl hydrolase family 9.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARW20213.1 6.85e-29 729 795 1 67
QMU26859.1 8.04e-24 248 741 89 564
ANP75672.1 7.10e-15 223 757 3 523
ABW27815.1 2.07e-14 223 413 18 233
QRX63715.1 1.07e-13 248 528 48 351

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6GDT_A 6.93e-08 273 782 60 541
Crystalstructure of exo-glucosidase/glucosaminidase VC0615 from Vibrio Cholerae [Vibrio cholerae O1 biovar El Tor str. N16961],6GDT_B Crystal structure of exo-glucosidase/glucosaminidase VC0615 from Vibrio Cholerae [Vibrio cholerae O1 biovar El Tor str. N16961],6GDT_C Crystal structure of exo-glucosidase/glucosaminidase VC0615 from Vibrio Cholerae [Vibrio cholerae O1 biovar El Tor str. N16961],6GDT_D Crystal structure of exo-glucosidase/glucosaminidase VC0615 from Vibrio Cholerae [Vibrio cholerae O1 biovar El Tor str. N16961],6GDT_E Crystal structure of exo-glucosidase/glucosaminidase VC0615 from Vibrio Cholerae [Vibrio cholerae O1 biovar El Tor str. N16961]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000038 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002325_00039.