Species | Listeria monocytogenes_B | |||||||||||
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Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Listeriaceae; Listeria; Listeria monocytogenes_B | |||||||||||
CAZyme ID | MGYG000002325_01126 | |||||||||||
CAZy Family | GH73 | |||||||||||
CAZyme Description | Internalin B | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 1134910; End: 1135668 Strand: + |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
NF033202 | GW_glycos_SH3 | 4.95e-22 | 92 | 171 | 1 | 78 | GW domain. The GW domain of Listeria belongs to the clan of SH3-like domains. A similar but broader model (PF13457) occurs in Pfam. The GW domain occurs as repeats on surface proteins of the cell-invading pathogenic bacterium Listeria monocytogenes, and is involved in binding to glycosaminoglycans. Members of this family include the GW-type internalin InlB and several paralogs. |
NF033202 | GW_glycos_SH3 | 6.56e-20 | 11 | 91 | 2 | 81 | GW domain. The GW domain of Listeria belongs to the clan of SH3-like domains. A similar but broader model (PF13457) occurs in Pfam. The GW domain occurs as repeats on surface proteins of the cell-invading pathogenic bacterium Listeria monocytogenes, and is involved in binding to glycosaminoglycans. Members of this family include the GW-type internalin InlB and several paralogs. |
pfam13457 | SH3_8 | 2.90e-17 | 97 | 172 | 1 | 74 | SH3-like domain. |
NF033202 | GW_glycos_SH3 | 4.95e-16 | 173 | 251 | 1 | 79 | GW domain. The GW domain of Listeria belongs to the clan of SH3-like domains. A similar but broader model (PF13457) occurs in Pfam. The GW domain occurs as repeats on surface proteins of the cell-invading pathogenic bacterium Listeria monocytogenes, and is involved in binding to glycosaminoglycans. Members of this family include the GW-type internalin InlB and several paralogs. |
pfam13457 | SH3_8 | 2.19e-14 | 16 | 88 | 2 | 73 | SH3-like domain. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
CBY48666.1 | 1.85e-179 | 1 | 252 | 321 | 572 |
QOF65656.1 | 1.85e-179 | 1 | 252 | 321 | 572 |
APO61250.1 | 1.85e-179 | 1 | 252 | 321 | 572 |
AMD27034.1 | 1.85e-179 | 1 | 252 | 321 | 572 |
AMD24113.1 | 1.85e-179 | 1 | 252 | 321 | 572 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5JQC_A | 2.69e-117 | 2 | 171 | 90 | 259 | Crystalstructure putative autolysin from Listeria monocytogenes [Listeria monocytogenes EGD-e] |
1M9S_A | 1.51e-17 | 2 | 241 | 348 | 583 | Crystalstructure of Internalin B (InlB), a Listeria monocytogenes virulence protein containing SH3-like domains. [Listeria monocytogenes] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P0DQD3 | 8.39e-17 | 2 | 241 | 381 | 616 | Internalin B OS=Listeria monocytogenes serotype 1/2a (strain EGD / Mackaness) OX=1334565 GN=inlB PE=1 SV=1 |
O33983 | 2.32e-16 | 9 | 249 | 596 | 834 | Protein Ami OS=Listeria monocytogenes serotype 1/2a (strain EGD / Mackaness) OX=1334565 GN=ami PE=3 SV=1 |
P0DQD2 | 3.80e-16 | 2 | 241 | 381 | 616 | Internalin B OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=inlB PE=1 SV=1 |
O32083 | 6.48e-07 | 14 | 90 | 203 | 278 | Exo-glucosaminidase LytG OS=Bacillus subtilis (strain 168) OX=224308 GN=lytG PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000054 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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