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CAZyme Information: MGYG000002325_01340
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Listeria monocytogenes_B | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Listeriaceae; Listeria; Listeria monocytogenes_B | |||||||||||
| CAZyme ID | MGYG000002325_01340 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | Chromosome partition protein Smc | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1312001; End: 1316920 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd13402 | LT_TF-like | 1.50e-44 | 1430 | 1552 | 1 | 117 | lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
| TIGR01760 | tape_meas_TP901 | 8.30e-39 | 223 | 629 | 2 | 345 | phage tail tape measure protein, TP901 family, core region. This model represents a reasonably well conserved core region of a family of phage tail proteins. The member from phage TP901-1 was characterized as a tail length tape measure protein in that a shortened form of the protein leads to phage with proportionately shorter tails. [Mobile and extrachromosomal element functions, Prophage functions] |
| pfam10145 | PhageMin_Tail | 3.01e-37 | 263 | 527 | 1 | 200 | Phage-related minor tail protein. Members of this family are found in putative phage tail tape measure proteins. |
| COG3953 | SLT | 4.66e-21 | 1418 | 1581 | 2 | 171 | SLT domain protein [Mobilome: prophages, transposons]. |
| COG5283 | COG5283 | 1.21e-05 | 55 | 1124 | 10 | 1019 | Phage-related tail protein [Mobilome: prophages, transposons]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AHF40958.1 | 0.0 | 1 | 1639 | 1 | 1639 |
| CDM16533.1 | 0.0 | 1 | 1639 | 1 | 1639 |
| AKI43539.1 | 0.0 | 1 | 1639 | 1 | 1639 |
| AKI40141.1 | 0.0 | 1 | 1639 | 1 | 1639 |
| AKI52051.1 | 0.0 | 1 | 1639 | 1 | 1639 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E7DNB6 | 2.14e-20 | 194 | 641 | 28 | 415 | Tape measure protein OS=Pneumococcus phage Dp-1 OX=59241 GN=TMP PE=4 SV=1 |
| P45931 | 3.53e-11 | 1428 | 1566 | 1362 | 1501 | Uncharacterized protein YqbO OS=Bacillus subtilis (strain 168) OX=224308 GN=yqbO PE=1 SV=2 |
| O64314 | 3.18e-10 | 201 | 423 | 167 | 398 | Probable tape measure protein OS=Escherichia phage P2 OX=10679 GN=T PE=3 SV=1 |
| P54334 | 8.64e-10 | 1359 | 1566 | 1057 | 1249 | Phage-like element PBSX protein XkdO OS=Bacillus subtilis (strain 168) OX=224308 GN=xkdO PE=4 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000031 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |