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CAZyme Information: MGYG000002331_00886
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Vibrio parahaemolyticus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio parahaemolyticus | |||||||||||
| CAZyme ID | MGYG000002331_00886 | |||||||||||
| CAZy Family | GH18 | |||||||||||
| CAZyme Description | Chitodextrinase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 968733; End: 971897 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH18 | 322 | 784 | 7.1e-72 | 0.9425675675675675 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3325 | ChiA | 4.43e-165 | 308 | 790 | 24 | 431 | Chitinase, GH18 family [Carbohydrate transport and metabolism]. |
| cd06548 | GH18_chitinase | 3.03e-102 | 324 | 782 | 1 | 322 | The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. |
| smart00636 | Glyco_18 | 2.09e-92 | 323 | 782 | 1 | 334 | Glyco_18 domain. |
| pfam06483 | ChiC | 9.21e-86 | 810 | 975 | 1 | 165 | Chitinase C. This ~170 aa region is found at the C-terminus of pfam00704. |
| pfam00704 | Glyco_hydro_18 | 3.53e-69 | 323 | 782 | 1 | 307 | Glycosyl hydrolases family 18. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ATI44212.1 | 0.0 | 1 | 1054 | 1 | 1054 |
| QHH01976.1 | 0.0 | 1 | 1054 | 1 | 1054 |
| QNE54471.1 | 0.0 | 1 | 1054 | 1 | 1054 |
| QHG96840.1 | 0.0 | 1 | 1054 | 1 | 1054 |
| AYF22121.1 | 0.0 | 1 | 1054 | 1 | 1054 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4TXG_A | 1.20e-281 | 289 | 977 | 121 | 788 | CrystalStructure of a Family GH18 Chitinase from Chromobacterium violaceum [Chromobacterium violaceum ATCC 12472] |
| 1ITX_A | 5.06e-49 | 323 | 784 | 13 | 408 | ChainA, Glycosyl Hydrolase [Niallia circulans] |
| 6KST_A | 2.19e-47 | 317 | 782 | 2 | 357 | Crystalstructure of the catalytic domain of chitinase ChiL from Chitiniphilus shinanonensis (CsChiL) [Chitiniphilus shinanonensis],6KST_B Crystal structure of the catalytic domain of chitinase ChiL from Chitiniphilus shinanonensis (CsChiL) [Chitiniphilus shinanonensis],6KXL_A Crystal structure of the catalytic domain of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis],6KXL_B Crystal structure of the catalytic domain of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis] |
| 6KXM_A | 1.01e-46 | 317 | 782 | 2 | 357 | Crystalstructure of D157N mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis],6KXM_B Crystal structure of D157N mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis] |
| 6KXN_A | 8.57e-46 | 317 | 782 | 2 | 357 | Crystalstructure of W50A mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis],6KXN_B Crystal structure of W50A mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose [Chitiniphilus shinanonensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P96156 | 0.0 | 1 | 1034 | 1 | 1023 | Chitodextrinase OS=Vibrio furnissii OX=29494 GN=endo I PE=1 SV=1 |
| P20533 | 1.03e-46 | 323 | 1033 | 45 | 676 | Chitinase A1 OS=Niallia circulans OX=1397 GN=chiA1 PE=1 SV=1 |
| P32470 | 1.81e-34 | 307 | 650 | 25 | 326 | Chitinase 1 OS=Aphanocladium album OX=12942 GN=CHI1 PE=1 SV=2 |
| P11797 | 1.18e-32 | 321 | 782 | 14 | 408 | Chitinase B OS=Serratia marcescens OX=615 GN=chiB PE=1 SV=1 |
| A6N6J0 | 4.81e-31 | 309 | 782 | 28 | 390 | Endochitinase 46 OS=Trichoderma harzianum OX=5544 GN=chit46 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001017 | 0.589521 | 0.408401 | 0.000454 | 0.000316 | 0.000267 |