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CAZyme Information: MGYG000002331_01620

You are here: Home > Sequence: MGYG000002331_01620

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Vibrio parahaemolyticus
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio parahaemolyticus
CAZyme ID MGYG000002331_01620
CAZy Family CBM69
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
126 MGYG000002331_3|CGC19 14119.97 7.6999
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002331 5262465 Isolate Bangladesh Asia
Gene Location Start: 1804695;  End: 1805075  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002331_01620.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM69 1 125 2.3e-49 0.9612403100775194

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02861 E_set_pullulanase_like 5.60e-04 10 69 3 58
Early set domain associated with the catalytic domain of pullulanase-like proteins. E or "early" set domains are associated with the catalytic domain of pullulanase at either the N-terminal or C-terminal end, and in a few instances at both ends. Pullulanase (also called dextrinase or alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The E set domain of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase. This domain is also a member of the CBM48 (Carbohydrate Binding Module 48) family whose members include maltooligosyl trehalose synthase, starch branching enzyme, glycogen branching enzyme, glycogen debranching enzyme, isoamylase, and the beta subunit of AMP-activated protein kinase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AMG09433.1 4.51e-93 1 126 1 126
QHH18327.1 2.15e-91 1 126 1 126
AWG87104.1 1.02e-90 1 126 47 172
QCO89323.1 4.18e-89 1 126 1 126
QLK49595.1 1.20e-88 1 126 1 126

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5X5S_A 2.57e-40 2 125 25 148
Ligandinduced structure of AmyP-SBD [uncultured bacterium]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000049 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002331_01620.