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CAZyme Information: MGYG000002331_02404
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Vibrio parahaemolyticus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio parahaemolyticus | |||||||||||
| CAZyme ID | MGYG000002331_02404 | |||||||||||
| CAZy Family | CBM73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 768921; End: 771467 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM73 | 282 | 330 | 2.4e-20 | 0.9444444444444444 |
| GH18 | 524 | 732 | 1.4e-19 | 0.5506756756756757 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3469 | Chi1 | 3.12e-138 | 503 | 846 | 7 | 329 | Chitinase [Carbohydrate transport and metabolism]. |
| cd02871 | GH18_chitinase_D-like | 5.62e-135 | 525 | 841 | 1 | 312 | GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus. |
| pfam00704 | Glyco_hydro_18 | 1.51e-16 | 526 | 827 | 1 | 307 | Glycosyl hydrolases family 18. |
| pfam17957 | Big_7 | 4.46e-12 | 341 | 404 | 1 | 62 | Bacterial Ig domain. This entry represents a bacterial ig-like domain that is found in glycosyl hydrolase enzymes. |
| cd02877 | GH18_hevamine_XipI_class_III | 7.57e-12 | 552 | 828 | 26 | 269 | This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AMG06700.1 | 0.0 | 1 | 848 | 1 | 848 |
| QDG86043.1 | 0.0 | 1 | 848 | 1 | 848 |
| QLE30010.1 | 0.0 | 1 | 848 | 1 | 848 |
| APU74493.1 | 0.0 | 1 | 848 | 1 | 848 |
| ANZ10804.1 | 0.0 | 1 | 848 | 1 | 848 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4TX8_A | 8.51e-107 | 524 | 845 | 106 | 420 | CrystalStructure of a Family GH18 Chitinase from Chromobacterium violaceum [Chromobacterium violaceum ATCC 12472] |
| 5KZ6_A | 3.42e-62 | 527 | 835 | 12 | 322 | 1.25Angstrom Crystal Structure of Chitinase from Bacillus anthracis. [Bacillus anthracis],5KZ6_B 1.25 Angstrom Crystal Structure of Chitinase from Bacillus anthracis. [Bacillus anthracis] |
| 3N11_A | 1.59e-61 | 527 | 835 | 9 | 319 | Crystalstricture of wild-type chitinase from Bacillus cereus NCTU2 [Bacillus cereus],3N12_A Crystal stricture of chitinase in complex with zinc atoms from Bacillus cereus NCTU2 [Bacillus cereus] |
| 3N15_A | 4.18e-61 | 527 | 835 | 9 | 319 | Crystalstricture of E145Q chitinase in complex with NAG from Bacillus cereus NCTU2 [Bacillus cereus] |
| 3N17_A | 1.52e-60 | 527 | 835 | 9 | 319 | Crystalstricture of E145Q/Y227F chitinase in complex with NAG from Bacillus cereus NCTU2 [Bacillus cereus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P27050 | 1.08e-63 | 451 | 848 | 111 | 517 | Chitinase D OS=Niallia circulans OX=1397 GN=chiD PE=1 SV=4 |
| Q05638 | 2.48e-58 | 525 | 836 | 264 | 590 | Exochitinase 1 OS=Streptomyces olivaceoviridis OX=1921 GN=chi01 PE=1 SV=1 |
| D4AVJ0 | 1.91e-52 | 544 | 837 | 17 | 323 | Probable class II chitinase ARB_00204 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_00204 PE=1 SV=2 |
| A5FB63 | 1.43e-42 | 336 | 836 | 930 | 1471 | Chitinase ChiA OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=chiA PE=1 SV=1 |
| P96156 | 1.48e-35 | 22 | 237 | 31 | 249 | Chitodextrinase OS=Vibrio furnissii OX=29494 GN=endo I PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000258 | 0.999048 | 0.000227 | 0.000167 | 0.000142 | 0.000131 |