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CAZyme Information: MGYG000002331_03824

You are here: Home > Sequence: MGYG000002331_03824

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Vibrio parahaemolyticus
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio parahaemolyticus
CAZyme ID MGYG000002331_03824
CAZy Family GH103
CAZyme Description Tn3 family transposase TnXax1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
323 MGYG000002331_4|CGC18 36768.67 7.2416
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002331 5262465 Isolate Bangladesh Asia
Gene Location Start: 2329032;  End: 2330003  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002331_03824.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH103 24 321 6.2e-120 0.9932203389830508

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13406 SLT_2 1.14e-150 23 319 1 292
Transglycosylase SLT domain. This family is related to the SLT domain pfam01464.
TIGR02283 MltB_2 1.93e-135 23 321 1 298
lytic murein transglycosylase. Members of this family are closely related to the MltB family lytic murein transglycosylases described by TIGR02282 and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many members of this family (unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (pfam01471), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does E. coli MltB in TIGR02282. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG2951 MltB 1.18e-131 5 321 20 335
Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis].
TIGR02282 MltB 1.88e-61 26 321 2 290
lytic murein transglycosylase B. This family consists of lytic murein transglycosylases (murein hydrolases) in the family of MltB, which is a membrane-bound lipoprotein in Escherichia coli. The N-terminal lipoprotein modification motif is conserved in about half the members of this family. The term Slt35 describes a naturally occurring soluble fragment of MltB. Members of this family never contain the putative peptidoglycan binding domain described by pfam01471, which is associated with several classes of bacterial cell wall lytic enzymes. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
PRK10760 PRK10760 1.93e-39 85 322 125 354
murein hydrolase B; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QET87106.1 1.16e-240 1 323 1 323
QHH08711.1 1.16e-240 1 323 1 323
AGB09334.1 1.16e-240 1 323 1 323
QPM83689.1 1.16e-240 1 323 1 323
AGQ90423.1 1.16e-240 1 323 1 323

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5ANZ_A 8.69e-74 22 319 46 341
CrystalStructure of SltB3 from Pseudomonas aeruginosa. [Pseudomonas aeruginosa],5AO7_A Crystal Structure of SltB3 from Pseudomonas aeruginosa in complex with NAG-anhNAM-pentapeptide [Pseudomonas aeruginosa]
5AO8_A 8.69e-74 22 319 46 341
CrystalStructure of SltB3 from Pseudomonas aeruginosa in complex with NAG-NAM-pentapeptide [Pseudomonas aeruginosa]
5O8X_A 9.96e-39 22 322 3 300
TheX-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa],5O8X_B The X-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa]
4ANR_A 2.05e-38 36 322 34 317
Crystalstructure of soluble lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
1LTM_A 3.37e-27 85 322 86 315
AcceleratedX-ray Structure Elucidation Of A 36 Kda Muramidase/transglycosylase Using Warp [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P41052 3.55e-26 85 322 127 356
Membrane-bound lytic murein transglycosylase B OS=Escherichia coli (strain K12) OX=83333 GN=mltB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000980 0.995287 0.003082 0.000223 0.000211 0.000195

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002331_03824.