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CAZyme Information: MGYG000002335_01357

You are here: Home > Sequence: MGYG000002335_01357

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Yersinia enterocolitica
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia enterocolitica
CAZyme ID MGYG000002335_01357
CAZy Family PL38
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
436 MGYG000002335_1|CGC12 49291.07 9.6449
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002335 4527941 Isolate not provided not provided
Gene Location Start: 1490060;  End: 1491370  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002335_01357.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL38 93 372 1.9e-110 0.996415770609319

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05426 Alginate_lyase 1.62e-102 92 372 1 274
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.
PRK00325 algL 1.89e-04 266 344 194 272
polysaccharide lyase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBY26415.1 0.0 1 436 1 436
QBP99809.1 0.0 1 436 1 436
VEB05597.1 0.0 1 436 1 436
VEF80972.1 0.0 1 436 1 436
AOF30951.1 0.0 1 436 1 436

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3NFV_A 4.41e-67 74 377 29 333
Crystalstructure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.95 A resolution [Bacteroides ovatus ATCC 8483],3NNB_A Crystal structure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.60 A resolution [Bacteroides ovatus ATCC 8483]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.006275 0.992673 0.000416 0.000218 0.000196 0.000173

TMHMM  Annotations      download full data without filtering help

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12 34