You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002335_03558
You are here: Home > Sequence: MGYG000002335_03558
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Yersinia enterocolitica | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia enterocolitica | |||||||||||
| CAZyme ID | MGYG000002335_03558 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | Pectinesterase A | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 3853594; End: 3854679 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 31 | 350 | 3.4e-81 | 0.9652777777777778 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 3.67e-123 | 1 | 358 | 46 | 405 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| pfam01095 | Pectinesterase | 9.27e-42 | 29 | 350 | 1 | 290 | Pectinesterase. |
| PLN02682 | PLN02682 | 9.87e-40 | 28 | 350 | 69 | 356 | pectinesterase family protein |
| PLN02990 | PLN02990 | 1.02e-34 | 19 | 350 | 250 | 549 | Probable pectinesterase/pectinesterase inhibitor |
| PLN02933 | PLN02933 | 2.11e-32 | 23 | 332 | 213 | 484 | Probable pectinesterase/pectinesterase inhibitor |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| VEA98246.1 | 1.65e-266 | 1 | 361 | 1 | 361 |
| CBY28749.1 | 1.65e-266 | 1 | 361 | 1 | 361 |
| QBP97869.1 | 1.65e-266 | 1 | 361 | 1 | 361 |
| VEF82874.1 | 1.65e-266 | 1 | 361 | 1 | 361 |
| AOF24895.1 | 2.74e-265 | 1 | 361 | 1 | 361 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3UW0_A | 1.31e-265 | 1 | 361 | 4 | 364 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 2NSP_A | 6.77e-137 | 25 | 358 | 1 | 337 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 1QJV_A | 3.69e-129 | 25 | 358 | 1 | 337 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 2NTB_A | 1.49e-128 | 25 | 358 | 1 | 337 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
| 5C1E_A | 7.47e-17 | 41 | 358 | 19 | 294 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0C1A8 | 1.13e-128 | 9 | 358 | 8 | 361 | Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1 |
| P0C1A9 | 6.47e-128 | 9 | 358 | 8 | 361 | Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1 |
| Q9FJ21 | 1.53e-28 | 19 | 350 | 249 | 548 | Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana OX=3702 GN=PME58 PE=2 SV=1 |
| D8VPP5 | 2.91e-22 | 23 | 336 | 58 | 327 | Pectinesterase 1 OS=Olea europaea OX=4146 PE=1 SV=1 |
| O22149 | 3.68e-22 | 29 | 351 | 206 | 491 | Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana OX=3702 GN=PME17 PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000250 | 0.999105 | 0.000175 | 0.000163 | 0.000155 | 0.000148 |