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CAZyme Information: MGYG000002336_00349

You are here: Home > Sequence: MGYG000002336_00349

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Megasphaera sp000417505
Lineage Bacteria; Firmicutes_C; Negativicutes; Veillonellales; Megasphaeraceae; Megasphaera; Megasphaera sp000417505
CAZyme ID MGYG000002336_00349
CAZy Family GH166
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1246 139948.33 4.6943
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002336 2615280 Isolate India Asia
Gene Location Start: 2092;  End: 5832  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002336_00349.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH166 730 877 4.5e-28 0.6473214285714286

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09931 DUF2163 2.91e-52 956 1107 11 161
Uncharacterized conserved protein (DUF2163). This domain, found in various hypothetical prokaryotic proteins, has no known function.
TIGR02218 phg_TIGR02218 7.20e-50 968 1229 1 224
phage conserved hypothetical protein BR0599. This model describes a family of proteins found almost exclusively in phage or in prophage regions of bacterial genomes, including the phage-like Rhodobacter capsulatus gene transfer agent, which packages DNA. An apparent exception is Wolbachia pipientis wMel, a bacterial endosymbiont of the fruit fly, which has several candidate phage-related genes physically separate from obvious prophage regions. [Mobile and extrachromosomal element functions, Prophage functions]
COG5449 COG5449 1.47e-43 961 1229 10 218
Uncharacterized protein [Function unknown].
pfam09356 Phage_BR0599 4.92e-26 1137 1217 1 80
Phage conserved hypothetical protein BR0599. This entry describes a family of proteins found almost exclusively in phage or in prophage regions of bacterial genomes, including the phage-like Rhodobacter capsulatus gene transfer agent, which packages DNA. An apparent exception is Wolbachia pipientis wMel, a bacterial endosymbiont of the fruit fly, which has several candidate phage-related genes physically separate from obvious prophage regions.
COG3868 COG3868 6.80e-10 735 897 102 264
Predicted glycosyl hydrolase, GH114 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVH85339.1 1.34e-206 2 897 58 966
BAG41638.1 1.12e-193 2 891 58 963
BAU39960.1 2.21e-176 2 893 57 971
AWY03089.1 5.83e-125 2 893 53 1030
AHF79788.1 1.50e-15 730 880 118 263

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6TBA_7A 3.26e-45 957 1229 11 289
Chain7A, Uncharacterized protein [Rhodobacter capsulatus SB 1003],6TBA_7B Chain 7B, Uncharacterized protein [Rhodobacter capsulatus SB 1003],6TBA_7C Chain 7C, Uncharacterized protein [Rhodobacter capsulatus SB 1003],6TEH_C Baseplate of native GTA particle computed with C3 symmetry [Rhodobacter capsulatus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000039 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002336_00349.