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CAZyme Information: MGYG000002345_01385
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Acinetobacter nosocomialis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter nosocomialis | |||||||||||
| CAZyme ID | MGYG000002345_01385 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 134167; End: 135312 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 2 | 361 | 2.6e-129 | 0.9745762711864406 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK00025 | lpxB | 2.90e-159 | 3 | 381 | 9 | 377 | lipid-A-disaccharide synthase; Reviewed |
| COG0763 | LpxB | 1.90e-137 | 2 | 380 | 8 | 380 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| pfam02684 | LpxB | 2.35e-111 | 3 | 358 | 6 | 354 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| TIGR00215 | lpxB | 1.06e-101 | 3 | 376 | 13 | 383 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| PRK14089 | PRK14089 | 1.51e-51 | 41 | 336 | 40 | 309 | lipid-A-disaccharide synthase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QGA43994.1 | 3.34e-274 | 1 | 381 | 11 | 391 |
| AZC04495.1 | 5.54e-273 | 1 | 381 | 11 | 391 |
| AZC07938.1 | 9.18e-272 | 1 | 381 | 11 | 391 |
| QPF42697.1 | 9.18e-272 | 1 | 381 | 11 | 391 |
| QBF78408.1 | 9.18e-272 | 1 | 381 | 11 | 391 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 4.04e-91 | 1 | 377 | 12 | 379 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 4.04e-91 | 1 | 377 | 12 | 379 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q6FA07 | 1.78e-216 | 1 | 376 | 17 | 392 | Lipid-A-disaccharide synthase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=lpxB PE=3 SV=1 |
| A1SYV0 | 3.87e-110 | 1 | 381 | 10 | 379 | Lipid-A-disaccharide synthase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lpxB PE=3 SV=1 |
| B1KNT0 | 2.32e-104 | 1 | 381 | 12 | 381 | Lipid-A-disaccharide synthase OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=lpxB PE=3 SV=1 |
| A5F627 | 9.03e-103 | 1 | 376 | 10 | 374 | Lipid-A-disaccharide synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lpxB PE=3 SV=1 |
| C3LQ19 | 9.03e-103 | 1 | 376 | 10 | 374 | Lipid-A-disaccharide synthase OS=Vibrio cholerae serotype O1 (strain M66-2) OX=579112 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000028 | 0.000004 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |