You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002351_02436
You are here: Home > Sequence: MGYG000002351_02436
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Klebsiella_A michiganensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella_A; Klebsiella_A michiganensis | |||||||||||
| CAZyme ID | MGYG000002351_02436 | |||||||||||
| CAZy Family | GH0 | |||||||||||
| CAZyme Description | HTH-type transcriptional activator RhaR | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 2608534; End: 2610345 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3664 | XynB | 4.95e-25 | 254 | 601 | 85 | 427 | Beta-xylosidase [Carbohydrate transport and metabolism]. |
| COG2207 | AraC | 3.40e-18 | 1 | 103 | 25 | 127 | AraC-type DNA-binding domain and AraC-containing proteins [Transcription]. |
| smart00342 | HTH_ARAC | 4.82e-18 | 12 | 95 | 1 | 84 | helix_turn_helix, arabinose operon control protein. |
| pfam12833 | HTH_18 | 7.77e-14 | 18 | 97 | 1 | 81 | Helix-turn-helix domain. |
| COG4977 | GlxA | 3.95e-12 | 7 | 102 | 231 | 326 | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QZG76345.1 | 0.0 | 1 | 603 | 166 | 768 |
| QFI06404.1 | 0.0 | 1 | 603 | 166 | 768 |
| QTH49221.1 | 0.0 | 1 | 603 | 166 | 768 |
| QQO65984.1 | 0.0 | 1 | 603 | 166 | 768 |
| QHS45742.1 | 0.0 | 1 | 603 | 166 | 768 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6SWI_A | 2.54e-11 | 10 | 95 | 20 | 105 | TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus] |
| 3OIO_A | 2.33e-07 | 2 | 100 | 13 | 111 | Crystalstructure of transcriptional regulator (AraC-type DNA-binding domain-containing proteins) from Chromobacterium violaceum [Chromobacterium violaceum] |
| 1BL0_A | 4.54e-07 | 5 | 95 | 20 | 110 | MultipleAntibiotic Resistance Protein (Mara)DNA COMPLEX [Escherichia coli] |
| 1XS9_A | 4.84e-07 | 5 | 95 | 23 | 113 | ChainA, Multiple antibiotic resistance protein marA [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q5HJR8 | 2.21e-39 | 5 | 572 | 164 | 714 | Uncharacterized HTH-type transcriptional regulator SACOL0084 OS=Staphylococcus aureus (strain COL) OX=93062 GN=SACOL0084 PE=4 SV=2 |
| Q6GKK1 | 2.98e-39 | 5 | 572 | 164 | 714 | Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1 |
| Q8NYT6 | 1.33e-38 | 5 | 572 | 164 | 714 | Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1 |
| Q6GD21 | 1.33e-38 | 5 | 572 | 164 | 714 | Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1 |
| Q936F1 | 1.79e-38 | 5 | 572 | 164 | 714 | Uncharacterized HTH-type transcriptional regulator OS=Staphylococcus aureus OX=1280 PE=4 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000051 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |