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CAZyme Information: MGYG000002353_00499

You are here: Home > Sequence: MGYG000002353_00499

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterococcus_B faecium
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus_B; Enterococcus_B faecium
CAZyme ID MGYG000002353_00499
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1092 120505.33 4.6309
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002353 3157885 Isolate Netherlands Europe
Gene Location Start: 516417;  End: 519695  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002353_00499.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 468 856 1.9e-124 0.984

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07602 DUF1565 2.55e-04 478 612 3 159
Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.
pfam13229 Beta_helix 0.002 565 690 13 114
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229 Beta_helix 0.004 600 763 1 128
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229 Beta_helix 0.006 561 664 42 141
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AOT77822.1 0.0 1 1092 1 1092
QTF89979.1 0.0 1 1092 1 1092
AUI17802.1 0.0 1 1092 1 1092
QMX44056.1 0.0 1 1092 1 1092
AUI20773.1 0.0 1 1092 1 1092

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.24e-35 473 749 18 293
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 1.78e-19 471 753 4 325
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22751 9.75e-56 91 733 34 623
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6 1.09e-37 473 749 43 318
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 1.09e-34 473 749 43 318
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004120 0.994424 0.000739 0.000268 0.000212 0.000206

TMHMM  Annotations      download full data without filtering help

start end
1070 1087