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CAZyme Information: MGYG000002353_01159

You are here: Home > Sequence: MGYG000002353_01159

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterococcus_B faecium
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus_B; Enterococcus_B faecium
CAZyme ID MGYG000002353_01159
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
212 MGYG000002353_1|CGC22 22483.47 3.9564
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002353 3157885 Isolate Netherlands Europe
Gene Location Start: 1173791;  End: 1174429  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002353_01159.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK11198 PRK11198 4.88e-12 23 77 90 146
LysM domain/BON superfamily protein; Provisional
pfam01476 LysM 1.57e-10 31 77 1 43
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
cd00118 LysM 4.66e-10 31 76 3 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257 LysM 8.03e-10 31 76 2 44
Lysin motif.
COG1652 XkdP 4.30e-04 14 81 196 266
Nucleoid-associated protein YgaU, contains BON and LysM domains [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHU87361.1 1.58e-128 1 212 1 212
APJ06472.1 1.58e-128 1 212 1 212
ATW36015.1 1.58e-128 1 212 1 212
QCV52479.1 1.58e-128 1 212 1 212
AOM15727.1 1.58e-128 1 212 1 212

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5FIM_A 3.50e-06 23 79 91 149
Thestructure of Kbp.K from E. coli [Escherichia coli],7PVC_A Chain A, Potassium binding protein Kbp [Escherichia coli K-12]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000481 0.998601 0.000214 0.000255 0.000224 0.000194

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002353_01159.