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CAZyme Information: MGYG000002365_01704

You are here: Home > Sequence: MGYG000002365_01704

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium globosum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium globosum
CAZyme ID MGYG000002365_01704
CAZy Family GH36
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
613 MGYG000002365_1|CGC29 68332.44 5.2672
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002365 2036949 Isolate Kenya Africa
Gene Location Start: 1975856;  End: 1977697  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.22

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02219 PLN02219 6.49e-56 82 543 64 554
probable galactinol--sucrose galactosyltransferase 2
PLN02684 PLN02684 6.36e-55 40 543 28 553
Probable galactinol--sucrose galactosyltransferase
pfam05691 Raffinose_syn 4.78e-51 87 543 72 568
Raffinose synthase or seed imbibition protein Sip1. This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1<-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (EC:2.4.1.82) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway. Raffinose family oligosaccharides (RFOs) are ubiquitous in plant seeds and are thought to play critical roles in the acquisition of tolerance to desiccation and seed longevity. Raffinose synthases are alkaline alpha-galactosidases and are solely responsible for RFO breakdown in germinating maize seeds, whereas acidic galactosidases appear to have other functions. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36C.
PLN02355 PLN02355 9.62e-48 82 537 64 556
probable galactinol--sucrose galactosyltransferase 1
PLN02711 PLN02711 1.77e-32 82 538 87 577
Probable galactinol--sucrose galactosyltransferase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIZ16930.1 0.0 5 613 1 609
ASW23415.1 0.0 1 613 1 613
AAK96217.2 0.0 1 613 1 613
ATO40584.1 0.0 5 613 1 609
ATU21144.1 3.43e-289 5 612 1 588

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8RX87 7.86e-47 90 543 72 551
Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=RFS6 PE=2 SV=2
Q94A08 1.76e-46 82 543 64 553
Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2
Q84VX0 7.03e-46 87 543 69 557
Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1
Q97U94 1.60e-37 187 569 189 556
Alpha-galactosidase OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=galS PE=1 SV=2
Q8VWN6 5.58e-32 82 539 106 599
Galactinol--sucrose galactosyltransferase OS=Pisum sativum OX=3888 GN=RFS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999980 0.000068 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002365_01704.