CAZyme Information: MGYG000002368_01851

Basic Information

• Species: Vibrio metoecus
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio metoecus
• CAZyme ID: MGYG000002368_01851
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
324	MGYG000002368_16|CGC1	35120.76	4.9901

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002368	3946363	Isolate	United States	North America

• Gene Location: Start: 43242; End: 44216 Strand: +

Full Sequence      

MVNQQQITEQIAKWSLKEKIGQLFILAFPGKSAQAAQQMIAEYNLGGCYLSQDNAETFVQ
AQELNRGLQQILDQHQRLPLLLGVDQEGAWGVLVGESTTGPGNLALGVSDQAVGTERMYQ
VFGEEMRGAGFNCILGPCCDVNLNPASPIIDTRSFGDQPEKVSLHSAAAVRGLHQGGITA
CAKHFPGHGDTHGDTHRDIPRVDKSYAELKLNDLAPFQAAIDAGVDLVMTSHILYPQLDA
NAPATLSATILQQVLRQDMGFDGVIISDSMNMGAIVNHYTPVDAAVKAVQAGITMIMLSE
EHYDHSDAYLDKQLAMIHGRDRCR

Enzyme Prediction     

No EC number prediction in MGYG000002368_01851.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	76	297	4e-59	0.9629629629629629

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00933	Glyco_hydro_3	1.86e-84	15	324	1	311	Glycosyl hydrolase family 3 N terminal domain.
COG1472	BglX	3.82e-74	14	301	1	282	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK05337	PRK05337	7.08e-44	60	298	41	279	beta-hexosaminidase; Provisional
PRK15098	PRK15098	2.10e-26	7	314	38	328	beta-glucosidase BglX.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ASK54280.1	3.19e-220	1	319	1	319
QEO44912.1	6.43e-220	1	319	1	319
AOW81425.1	1.29e-219	1	319	1	319
AMG03069.1	2.13e-218	1	319	1	319
ATD26159.1	6.09e-218	1	319	1	319

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6K5J_A	6.92e-61	15	317	12	316	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3BMX_A	7.18e-54	11	298	39	348	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	2.58e-53	11	298	13	322	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	4.02e-53	11	298	43	352	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
3TEV_A	7.80e-49	21	296	19	290	Thecrystal structure of glycosyl hydrolase from Deinococcus radiodurans R1 [Deinococcus radiodurans R1],3TEV_B The crystal structure of glycosyl hydrolase from Deinococcus radiodurans R1 [Deinococcus radiodurans R1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	3.93e-53	11	298	39	348	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	7.40e-44	38	298	57	335	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
Q7NWB7	2.66e-29	34	310	19	295	Beta-hexosaminidase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) OX=243365 GN=nagZ PE=3 SV=1
Q2Y863	3.22e-29	121	298	107	282	Beta-hexosaminidase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) OX=323848 GN=nagZ PE=3 SV=1
A9M1Z4	2.79e-28	37	272	25	262	Beta-hexosaminidase OS=Neisseria meningitidis serogroup C (strain 053442) OX=374833 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000047	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002368_01851.