dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002369_01490

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Species

Clostridioides difficile

Lineage

Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile

CAZyme ID

MGYG000002369_01490

CAZy Family

GH73

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
630		71699.32	8.306

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002369	4190038	Isolate	United States	North America

Gene Location

Start: 1615438; End: 1617330 Strand: +

No EC number prediction in MGYG000002369_01490.

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00877	NLPC_P60	1.97e-28	524	628	4	105	NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
COG0791	Spr	1.61e-22	509	627	75	197	Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].
PRK13914	PRK13914	2.34e-16	512	621	369	473	invasion associated endopeptidase.
NF033742	NlpC_p60_RipB	4.91e-16	513	630	81	204	NlpC/P60 family peptidoglycan endopeptidase RipB.
PRK10838	spr	8.07e-15	517	630	67	185	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase.

Hit ID	Query Start	Query End	Hit Start	Hit End
QPK96281.1	1	630	1	630
AYD13939.1	1	630	1	630
QGS38923.1	1	630	1	630
QUP85393.1	1	630	1	630
AYD06714.1	1	630	1	630

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7CFL_A	2.00e-22	510	630	15	138	ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile]
6BIQ_A	1.19e-18	473	617	122	265	Structureof NlpC2 from Trichomonas vaginalis [Trichomonas vaginalis],6BIQ_B Structure of NlpC2 from Trichomonas vaginalis [Trichomonas vaginalis],6BIQ_C Structure of NlpC2 from Trichomonas vaginalis [Trichomonas vaginalis],6BIQ_D Structure of NlpC2 from Trichomonas vaginalis [Trichomonas vaginalis]
6BIO_A	1.32e-17	405	617	67	265	Structureof NlpC1 from Trichomonas vaginalis [Trichomonas vaginalis]
6BIM_A	1.46e-16	405	617	67	265	Structureof NlpC1 from Trichomonas vaginalis [Trichomonas vaginalis]
6B8C_A	1.99e-15	512	614	31	131	Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P45950	2.40e-30	28	326	16	316	Uncharacterized protein YqbQ OS=Bacillus subtilis (strain 168) OX=224308 GN=yqbQ PE=4 SV=1
P54336	5.15e-29	28	326	16	316	Phage-like element PBSX protein XkdQ OS=Bacillus subtilis (strain 168) OX=224308 GN=xkdQ PE=4 SV=1
Q736M3	2.11e-16	510	630	212	332	Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) OX=222523 GN=ykfC PE=1 SV=1
Q8NNK6	5.66e-16	512	602	101	186	Probable endopeptidase Cgl2188 OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=Cgl2188 PE=3 SV=1
A4QFQ3	5.90e-16	512	602	103	188	Probable endopeptidase cgR_2070 OS=Corynebacterium glutamicum (strain R) OX=340322 GN=cgR_2070 PE=1 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000062	0.000000	0.000000	0.000000	0.000000	0.000000

There is no transmembrane helices in MGYG000002369_01490.